Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.76□□□□□ -1.17
CNGA1P29973 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.76□□□□□ -1.17
CNGA1P29973 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CNGA1P29973 AL596275.2-203ENST00000641951 371 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.76□□□□□ -1.17
CNGA1P29973 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 PSMC1P4-201ENST00000515236 1327 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CNGA1P29973 AQP4-AS1-202ENST00000578701 2177 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CNGA1P29973 AL512329.1-201ENST00000404600 1592 ntBASIC7.76□□□□□ -1.17
CNGA1P29973 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 AC132219.2-201ENST00000624416 2327 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC7.75□□□□□ -1.17
CNGA1P29973 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 AC022819.1-201ENST00000563495 3910 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 RNU6-1176P-201ENST00000390955 107 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 UBBP1-201ENST00000392399 473 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 RPL12P23-201ENST00000405880 490 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 VN1R31P-201ENST00000417498 730 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 FABP5P1-201ENST00000423401 411 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC7.75□□□□□ -1.17
CNGA1P29973 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 SCAND3P1-201ENST00000439854 1060 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 NMNAT1P3-201ENST00000457517 888 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC7.75□□□□□ -1.17
CNGA1P29973 SEC62-AS1-201ENST00000479626 346 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC7.75□□□□□ -1.17
CNGA1P29973 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.75□□□□□ -1.17
CNGA1P29973 AC124891.1-201ENST00000536322 519 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 NXPE2P1-201ENST00000543705 726 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC7.75□□□□□ -1.17
CNGA1P29973 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.75□□□□□ -1.17
CNGA1P29973 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 DMD-211ENST00000378707 7410 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.75□□□□□ -1.17
CNGA1P29973 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 CBR4-201ENST00000306193 3443 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
CNGA1P29973 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC7.74□□□□□ -1.17
CNGA1P29973 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
CNGA1P29973 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
CNGA1P29973 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNGA1P29973 C1D-202ENST00000407324 1379 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 AC129502.1-201ENST00000623261 1654 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNGA1P29973 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
CNGA1P29973 RNA5SP485-201ENST00000365053 119 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.74□□□□□ -1.17
CNGA1P29973 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
CNGA1P29973 PRELID1P1-201ENST00000403549 660 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AL590635.1-201ENST00000406314 586 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 RNA5SP431-201ENST00000410312 120 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 TRIM60P17-201ENST00000415181 719 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC7.74□□□□□ -1.17
CNGA1P29973 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC7.74□□□□□ -1.17
CNGA1P29973 NPM1P26-201ENST00000426339 738 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 AC092106.2-201ENST00000436597 487 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 ARMC4P1-201ENST00000438905 707 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 DEFA11P-201ENST00000446470 261 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC7.74□□□□□ -1.17
CNGA1P29973 MTND2P30-201ENST00000456663 382 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.74□□□□□ -1.17
CNGA1P29973 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC7.74□□□□□ -1.17
CNGA1P29973 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
CNGA1P29973 AC108157.1-201ENST00000510511 539 ntBASIC7.74□□□□□ -1.17
CNGA1P29973 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC7.74□□□□□ -1.17
CNGA1P29973 RNU6-491P-201ENST00000516099 110 ntBASIC7.74□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms