Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC8.8□□□□□ -1
RXRBP28702 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC8.8□□□□□ -1
RXRBP28702 EEF1A1P37-201ENST00000522748 715 ntBASIC8.8□□□□□ -1
RXRBP28702 MORF4L1P3-201ENST00000525966 950 ntBASIC8.8□□□□□ -1
RXRBP28702 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 AC092121.1-201ENST00000569452 202 ntBASIC8.8□□□□□ -1
RXRBP28702 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 AC010615.3-201ENST00000597319 394 ntBASIC8.8□□□□□ -1
RXRBP28702 AC093424.1-201ENST00000604999 338 ntBASIC8.8□□□□□ -1
RXRBP28702 AC026585.1-201ENST00000619582 524 ntBASIC8.8□□□□□ -1
RXRBP28702 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 AC096656.1-201ENST00000623826 1364 ntBASIC8.8□□□□□ -1
RXRBP28702 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 GTF2A1-203ENST00000553612 6306 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.8□□□□□ -1
RXRBP28702 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.8□□□□□ -1
RXRBP28702 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC8.8□□□□□ -1
RXRBP28702 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 ZNF969P-201ENST00000510345 2341 ntBASIC8.8□□□□□ -1
RXRBP28702 CASC19-261ENST00000641853 1638 ntBASIC8.8□□□□□ -1
RXRBP28702 AC106754.1-201ENST00000562632 1513 ntBASIC8.8□□□□□ -1
RXRBP28702 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.8□□□□□ -1
RXRBP28702 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 ATM-215ENST00000530958 5718 ntTSL 2 BASIC8.79□□□□□ -1
RXRBP28702 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 AC241584.2-201ENST00000637142 2090 ntBASIC8.79□□□□□ -1
RXRBP28702 AKAP3-201ENST00000228850 3339 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RXRBP28702 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
RXRBP28702 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 VTRNA3-1P-201ENST00000362552 102 ntBASIC8.79□□□□□ -1
RXRBP28702 RPS3AP2-201ENST00000407190 754 ntBASIC8.79□□□□□ -1
RXRBP28702 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 RPL5P6-201ENST00000425640 886 ntBASIC8.79□□□□□ -1
RXRBP28702 AC096638.2-201ENST00000434965 711 ntBASIC8.79□□□□□ -1
RXRBP28702 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 AL451063.1-201ENST00000450164 1133 ntBASIC8.79□□□□□ -1
RXRBP28702 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 RN7SL826P-201ENST00000479724 288 ntBASIC8.79□□□□□ -1
RXRBP28702 RN7SL187P-201ENST00000495587 303 ntBASIC8.79□□□□□ -1
RXRBP28702 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC8.79□□□□□ -1
RXRBP28702 PRELID3BP7-201ENST00000503606 469 ntBASIC8.79□□□□□ -1
RXRBP28702 NDUFA5P12-201ENST00000503796 343 ntBASIC8.79□□□□□ -1
RXRBP28702 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 AC021106.1-201ENST00000509020 1058 ntBASIC8.79□□□□□ -1
RXRBP28702 AC114781.3-201ENST00000512083 142 ntBASIC8.79□□□□□ -1
RXRBP28702 RNA5SP206-201ENST00000516703 121 ntBASIC8.79□□□□□ -1
RXRBP28702 IGHVIII-67-3-201ENST00000517650 232 ntBASIC8.79□□□□□ -1
RXRBP28702 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.79□□□□□ -1
RXRBP28702 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC8.79□□□□□ -1
RXRBP28702 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 AC022404.1-201ENST00000555320 273 ntBASIC8.79□□□□□ -1
RXRBP28702 CSNK1A1P1-202ENST00000563423 981 ntBASIC8.79□□□□□ -1
RXRBP28702 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC8.79□□□□□ -1
RXRBP28702 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 AC008751.2-201ENST00000597885 980 ntBASIC8.79□□□□□ -1
RXRBP28702 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC8.79□□□□□ -1
RXRBP28702 AC074276.2-201ENST00000619891 348 ntBASIC8.79□□□□□ -1
RXRBP28702 5S_rRNA.28-201ENST00000638107 119 ntBASIC8.79□□□□□ -1
RXRBP28702 PKD1L1-201ENST00000289672 9092 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 CYB5D1-201ENST00000332439 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
RXRBP28702 AP001002.1-201ENST00000625148 1513 ntBASIC8.79□□□□□ -1
RXRBP28702 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC8.79□□□□□ -1
RXRBP28702 HIPK1-211ENST00000626993 8016 ntTSL 5 BASIC8.79□□□□□ -1
RXRBP28702 ZNF512-201ENST00000355467 3541 ntAPPRIS P2 TSL 2 BASIC8.79□□□□□ -1
RXRBP28702 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.79□□□□□ -1
RXRBP28702 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC8.78□□□□□ -1
RXRBP28702 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RXRBP28702 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
RXRBP28702 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
RXRBP28702 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC8.78□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 196.8 ms