Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RN7SKP146-201ENST00000410242 334 ntBASIC6.44□□□□□ -1.38
CDH3P22223 RN7SKP296-201ENST00000411185 341 ntBASIC6.44□□□□□ -1.38
CDH3P22223 AL691447.1-201ENST00000419456 387 ntBASIC6.44□□□□□ -1.38
CDH3P22223 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 FAM183DP-201ENST00000421987 399 ntBASIC6.44□□□□□ -1.38
CDH3P22223 AC245884.2-201ENST00000426257 404 ntBASIC6.44□□□□□ -1.38
CDH3P22223 RPL34P27-201ENST00000428810 349 ntBASIC6.44□□□□□ -1.38
CDH3P22223 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 AC245291.3-201ENST00000443400 292 ntBASIC6.44□□□□□ -1.38
CDH3P22223 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 LECT2-203ENST00000512872 762 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH3P22223 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 AL008582.1-201ENST00000609612 442 ntBASIC6.44□□□□□ -1.38
CDH3P22223 CNTNAP3P1-201ENST00000616657 906 ntBASIC6.44□□□□□ -1.38
CDH3P22223 AL031658.2-201ENST00000616850 651 ntBASIC6.44□□□□□ -1.38
CDH3P22223 LINC01108-202ENST00000635227 776 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH3P22223 AL354702.2-202ENST00000641481 890 ntBASIC6.44□□□□□ -1.38
CDH3P22223 AC217777.1-201ENST00000570034 1471 ntBASIC6.44□□□□□ -1.38
CDH3P22223 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 AC011504.1-201ENST00000623331 4103 ntBASIC6.44□□□□□ -1.38
CDH3P22223 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 AC079949.2-201ENST00000617117 2933 ntBASIC6.44□□□□□ -1.38
CDH3P22223 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH3P22223 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH3P22223 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH3P22223 AC093278.2-201ENST00000564956 2485 ntBASIC6.43□□□□□ -1.38
CDH3P22223 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 MTCO1P46-201ENST00000451639 1491 ntBASIC6.43□□□□□ -1.38
CDH3P22223 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 AC020658.2-201ENST00000559030 4020 ntBASIC6.43□□□□□ -1.38
CDH3P22223 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CDH3P22223 RN7SKP38-201ENST00000410782 309 ntBASIC6.43□□□□□ -1.38
CDH3P22223 RANP6-201ENST00000413691 644 ntBASIC6.43□□□□□ -1.38
CDH3P22223 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.43□□□□□ -1.38
CDH3P22223 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 AL451136.1-201ENST00000435399 325 ntBASIC6.43□□□□□ -1.38
CDH3P22223 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH3P22223 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH3P22223 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH3P22223 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 UBBP5-201ENST00000446970 266 ntBASIC6.43□□□□□ -1.38
CDH3P22223 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH3P22223 AC099670.1-201ENST00000455141 783 ntBASIC6.43□□□□□ -1.38
CDH3P22223 YRDCP3-201ENST00000456507 480 ntBASIC6.43□□□□□ -1.38
CDH3P22223 RBMY2HP-201ENST00000457961 720 ntBASIC6.43□□□□□ -1.38
CDH3P22223 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH3P22223 RN7SKP67-201ENST00000515905 235 ntBASIC6.43□□□□□ -1.38
CDH3P22223 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 AC138207.8-204ENST00000579588 527 ntBASIC6.43□□□□□ -1.38
CDH3P22223 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 WBP1LP11-201ENST00000586141 328 ntBASIC6.43□□□□□ -1.38
CDH3P22223 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 AC011497.2-201ENST00000600255 639 ntBASIC6.43□□□□□ -1.38
CDH3P22223 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH3P22223 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH3P22223 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.43□□□□□ -1.38
CDH3P22223 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.43□□□□□ -1.38
CDH3P22223 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH3P22223 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 PSMC1P4-201ENST00000515236 1327 ntBASIC6.43□□□□□ -1.38
CDH3P22223 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH3P22223 LINC02532-207ENST00000436659 1387 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH3P22223 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH3P22223 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH3P22223 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH3P22223 AC096992.2-201ENST00000609553 1684 ntBASIC6.42□□□□□ -1.38
CDH3P22223 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH3P22223 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH3P22223 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH3P22223 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH3P22223 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.42□□□□□ -1.38
CDH3P22223 AL136531.3-201ENST00000624378 3658 ntBASIC6.42□□□□□ -1.38
CDH3P22223 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDH3P22223 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms