Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC007671.1-201ENST00000616957 830 ntBASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 AC087893.2-201ENST00000623272 255 ntBASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 AC116667.2-201ENST00000641075 823 ntBASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.2□□□□□ -1.58
RCL1Q9Y2P8 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL121768.1-201ENST00000613917 2544 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 RNA5SP301-201ENST00000362537 121 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 RNU11-201ENST00000387069 134 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL050305.1-201ENST00000399993 1230 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL359092.1-201ENST00000417156 265 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC009518.3-201ENST00000438972 253 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 ZNF32-AS1-201ENST00000453284 434 ntTSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 SNORA35.1-201ENST00000458908 128 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 GLYCTK-AS1-203ENST00000493616 445 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC008429.4-201ENST00000521201 182 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC068205.2-201ENST00000532864 771 ntTSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 BMS1P8-201ENST00000565049 1178 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 MRPL45P2-203ENST00000573318 473 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL360012.1-201ENST00000602813 131 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 COX6CP16-201ENST00000603667 216 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC006328.2-201ENST00000623198 397 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC009120.7-201ENST00000623452 780 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AC012005.2-201ENST00000624333 397 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 HSPD1P1-201ENST00000503199 1726 ntBASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.19□□□□□ -1.58
RCL1Q9Y2P8 NCOA4-206ENST00000585056 2124 ntTSL 2 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL049869.1-201ENST00000556933 1402 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL355834.1-201ENST00000556602 3965 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 RNU11-6P-201ENST00000391127 133 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 RPL5P20-201ENST00000403848 896 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL096800.1-201ENST00000405326 893 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL136100.1-201ENST00000407696 330 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 NRIR-202ENST00000414795 506 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC023141.1-201ENST00000419418 379 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL590399.2-201ENST00000427536 309 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC009963.4-201ENST00000448535 339 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 RPL7P14-201ENST00000449851 741 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 RPL7AP71-201ENST00000451120 739 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 OR7E7P-201ENST00000455678 1012 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 RN7SL390P-201ENST00000470634 284 ntBASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.18□□□□□ -1.58
RCL1Q9Y2P8 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms