Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC091768.1-201ENST00000609258 930 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC006249.1-201ENST00000621223 471 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC006328.2-201ENST00000623198 397 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC012005.2-201ENST00000624333 397 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 Z97989.1-201ENST00000531702 2421 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 MKI67P1-201ENST00000604297 1460 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ZNF519-207ENST00000590202 2830 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AL160408.3-201ENST00000442382 3564 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ARNT-201ENST00000354396 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC073365.1-203ENST00000641055 1992 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 LYSMD3-201ENST00000315948 4259 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 PABPC1P8-201ENST00000452851 2086 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SKP77-201ENST00000363261 353 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 TAAR2-202ENST00000367931 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 SNORD94-201ENST00000386037 137 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 FDPSP5-201ENST00000399474 1057 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SKP205-201ENST00000410999 307 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AL663061.1-201ENST00000416625 580 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 GAPDHP75-201ENST00000433910 943 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC114878.1-201ENST00000441166 358 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 SNRPBP1-201ENST00000443634 282 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 KF459542.1-201ENST00000450908 553 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC129807.1-201ENST00000471614 591 ntTSL 4 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC044810.1-201ENST00000480271 711 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SL502P-201ENST00000481857 290 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SL382P-201ENST00000482631 282 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SKP70-201ENST00000516655 271 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 BTG1P1-201ENST00000540396 508 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SL199P-201ENST00000578752 281 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SL656P-201ENST00000579044 281 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 CTSLP2-201ENST00000580501 394 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RN7SL404P-201ENST00000582421 281 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC125494.2-201ENST00000602431 657 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC036176.3-201ENST00000602456 418 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC061999.1-201ENST00000624454 177 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AL596275.2-207ENST00000641188 675 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RIPOR2-207ENST00000540914 3614 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 AC007159.1-201ENST00000566529 4706 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.82□□□□□ -1.32
DKK3Q9UBP4 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
DKK3Q9UBP4 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
DKK3Q9UBP4 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms