Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 Y_RNA.145-201ENST00000363527 102 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RNY3P3-201ENST00000363816 102 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RNY4P34-201ENST00000364779 95 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 CBWD1-207ENST00000382447 1241 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 MIR16-1-201ENST00000385271 89 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 U8.14-201ENST00000390843 143 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL354719.1-201ENST00000406535 843 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 MIR548P-201ENST00000408336 84 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL023773.2-201ENST00000412173 1005 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RPSAP21-201ENST00000414293 885 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 PIGFP2-201ENST00000421400 651 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 DHRS9-203ENST00000421653 1044 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL109810.1-201ENST00000435008 495 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL049733.1-201ENST00000440178 603 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL512605.1-202ENST00000441919 381 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL590365.1-201ENST00000450788 243 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 C1DP4-201ENST00000455429 424 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC112206.1-201ENST00000468416 477 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC026798.1-201ENST00000468490 482 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC107029.1-201ENST00000484675 465 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 RPS15AP36-201ENST00000492022 382 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC097522.1-201ENST00000507811 1042 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC017037.1-201ENST00000508460 471 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC113355.1-201ENST00000510512 491 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 RNA5SP40-201ENST00000517147 110 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC023403.1-202ENST00000521139 759 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC009806.1-201ENST00000526112 519 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 BRD9P1-201ENST00000529855 560 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 TBX5-AS1-203ENST00000531202 822 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 TUBA1C-204ENST00000549183 696 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 MRPL45P2-203ENST00000573318 473 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC091810.1-201ENST00000603131 325 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC136443.5-201ENST00000603741 370 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC115286.1-201ENST00000604298 434 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RPL17P3-201ENST00000605695 525 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC103710.4-201ENST00000609301 899 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RMST_3.1-201ENST00000611651 109 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 7SK.10-201ENST00000621414 298 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 RMST_7.1-201ENST00000621935 268 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC016866.3-201ENST00000624037 714 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC091905.1-201ENST00000624400 311 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC009122.1-201ENST00000640559 1218 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 OR4K17-202ENST00000641386 4886 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 CCNB1IP1-202ENST00000358932 1479 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL353807.3-201ENST00000500626 2505 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC138409.1-201ENST00000505001 3598 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 MAPK10-210ENST00000449047 2382 ntTSL 5 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AL139805.2-201ENST00000455305 2433 ntBASIC7.98□□□□□ -1.13
USB1Q9BQ65 C9orf72-206ENST00000619707 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
USB1Q9BQ65 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
USB1Q9BQ65 AC107398.3-201ENST00000562284 7000 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC091304.1-201ENST00000564897 3034 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 DCLRE1C-203ENST00000378242 1933 ntTSL 2 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 DIS3L-201ENST00000319194 3763 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ADAM20P3-201ENST00000508710 2106 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ZNF733P-202ENST00000444809 1573 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 LINC01354-202ENST00000435574 2860 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 TMCC1-202ENST00000426664 5484 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 TAPT1-AS1-201ENST00000570786 2165 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 MAN1A2P1-201ENST00000590286 1400 ntBASIC7.97□□□□□ -1.13
USB1Q9BQ65 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
USB1Q9BQ65 SLC17A1-201ENST00000244527 1844 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
USB1Q9BQ65 AC100756.3-201ENST00000618455 1816 ntBASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms