Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC012254.5-201ENST00000623573 478 ntBASIC6.44□□□□□ -1.38
VMP1Q96GC9 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
VMP1Q96GC9 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.44□□□□□ -1.38
VMP1Q96GC9 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
VMP1Q96GC9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 OLMALINC-203ENST00000641087 3779 ntBASIC6.44□□□□□ -1.38
VMP1Q96GC9 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.44□□□□□ -1.38
VMP1Q96GC9 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
VMP1Q96GC9 TRIM53CP-201ENST00000531490 1354 ntBASIC6.44□□□□□ -1.38
VMP1Q96GC9 AP002800.1-201ENST00000624982 2225 ntBASIC6.44□□□□□ -1.38
VMP1Q96GC9 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC245100.2-201ENST00000454544 1679 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 RN7SKP189-201ENST00000365042 330 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 S100A7L2-201ENST00000368725 339 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 OR2W4P-201ENST00000406496 926 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC096644.3-201ENST00000416788 338 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 H3F3BP1-201ENST00000440551 403 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 GOT2P2-201ENST00000450663 1251 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AL359839.1-201ENST00000451975 1160 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC239798.3-201ENST00000454459 408 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 NMNAT1P3-201ENST00000457517 888 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC135721.2-201ENST00000464237 300 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 MTCYBP44-201ENST00000514835 823 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 RNA5SP278-201ENST00000517055 102 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 MIR378C-201ENST00000578683 81 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC130324.2-201ENST00000580873 638 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC006262.2-201ENST00000599127 612 ntTSL 3 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AL138960.1-201ENST00000613838 513 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC092070.2-203ENST00000598377 3644 ntBASIC6.43□□□□□ -1.38
VMP1Q96GC9 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VMP1Q96GC9 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
VMP1Q96GC9 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC074141.1-201ENST00000588129 2995 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC013488.1-201ENST00000526618 1838 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 OR11H13P-201ENST00000359695 979 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 RN7SKP47-201ENST00000365347 328 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 AL079341.1-201ENST00000404701 1207 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VMP1Q96GC9 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 EIF4A1P2-201ENST00000422633 1220 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 RN7SL390P-201ENST00000470634 284 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC096743.1-201ENST00000485172 319 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.42□□□□□ -1.38
VMP1Q96GC9 RN7SKP248-201ENST00000516278 305 ntBASIC6.42□□□□□ -1.38
VMP1Q96GC9 SNORD116-30-201ENST00000516468 85 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms