Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
CDC42BPAQ5VT25 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 RNA5SP234-201ENST00000363916 119 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 SNORA58B-201ENST00000364259 136 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 VN1R110P-201ENST00000438988 971 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 GAS5-218ENST00000448718 565 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 RPSAP37-201ENST00000470913 821 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 DPPA2P4-201ENST00000563717 878 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 MIR8089-201ENST00000620165 82 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 CTNNA1P1-201ENST00000515849 2728 ntBASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 SLC7A2-204ENST00000494857 7622 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
CDC42BPAQ5VT25 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AL355433.1-201ENST00000422804 300 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 BX119321.1-201ENST00000428912 797 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC073909.1-201ENST00000447112 999 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 MYL6-213ENST00000549017 502 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC022919.1-201ENST00000624979 626 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 MALAT1-202ENST00000534336 8708 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC024587.1-201ENST00000505925 2157 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC107398.3-201ENST00000562284 7000 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 RN7SKP77-201ENST00000363261 353 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 BMS1P17-202ENST00000416720 316 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 IGKV1OR10-1-201ENST00000442306 329 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 IGKV1OR22-5-201ENST00000458718 354 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AL122020.1-201ENST00000472287 459 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 SSX6-203ENST00000509958 336 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 RN7SL544P-201ENST00000617232 284 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 RN7SL763P-201ENST00000620922 284 ntBASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
CDC42BPAQ5VT25 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 CDH8-203ENST00000577390 9721 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 USP3-201ENST00000268049 5311 ntTSL 5 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AL136981.1-203ENST00000451452 3844 ntBASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 ZNF716-201ENST00000420713 5197 ntAPPRIS P1 TSL 4 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 MIR375-201ENST00000362103 64 ntBASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AL391422.1-201ENST00000402155 436 ntBASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 DPPA2P3-201ENST00000411853 655 ntBASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC9.3□□□□□ -0.92
CDC42BPAQ5VT25 AC009237.1-201ENST00000442127 744 ntBASIC9.3□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms