Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 HTR1DP1-201ENST00000616500 888 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 MRPL57P1-201ENST00000621486 265 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3AP84243 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.77□□□□□ -1.49
H3F3AP84243 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
H3F3AP84243 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 SMG1P5-202ENST00000529428 4219 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 SMG1P2-201ENST00000566127 4221 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3AP84243 TMCC1P1-201ENST00000518897 1980 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 AC007159.1-201ENST00000566529 4706 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 FAM32BP-201ENST00000344033 333 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 SNORD35A-201ENST00000363389 86 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 SNX24-202ENST00000395451 1050 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
H3F3AP84243 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 RN7SL612P-201ENST00000497704 295 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.76□□□□□ -1.49
H3F3AP84243 MRPS5P3-201ENST00000515577 166 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AC138517.1-201ENST00000515724 568 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 IGKV1D-22-201ENST00000518953 324 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 TDGP1-201ENST00000543961 1229 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AL121579.2-201ENST00000555466 590 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.76□□□□□ -1.49
H3F3AP84243 AC037479.1-201ENST00000558361 625 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AC026898.1-201ENST00000586404 571 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 AL132640.3-201ENST00000630473 177 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
H3F3AP84243 AC105235.1-201ENST00000623208 1816 ntBASIC5.76□□□□□ -1.49
H3F3AP84243 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
H3F3AP84243 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
H3F3AP84243 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
H3F3AP84243 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
H3F3AP84243 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 AL451142.1-201ENST00000375867 775 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 RN7SKP281-201ENST00000410472 352 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 RPL21P50-201ENST00000417698 477 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 AC097721.1-201ENST00000427150 1253 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 ARMC4P1-201ENST00000438905 707 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3AP84243 RPL12P49-201ENST00000441100 121 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 RPS18P1-201ENST00000447840 458 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AL451063.1-201ENST00000450164 1133 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
H3F3AP84243 RBMY2HP-201ENST00000457961 720 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AC004890.1-201ENST00000461005 181 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 NPM1P27-201ENST00000502784 830 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC124891.1-201ENST00000536322 519 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC073916.1-201ENST00000545095 130 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.75□□□□□ -1.49
H3F3AP84243 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 TPRX1P1-201ENST00000557620 319 ntBASIC5.75□□□□□ -1.49
H3F3AP84243 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
H3F3AP84243 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
H3F3AP84243 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
H3F3AP84243 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms