Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.63□□□□□ -1.35
BRCA2P51587 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
BRCA2P51587 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 OR4C1P-202ENST00000641065 1569 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 ASPH-209ENST00000517903 2658 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
BRCA2P51587 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 GNL2P1-201ENST00000451274 2190 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 AC012519.1-201ENST00000424588 610 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 RPEL1-201ENST00000441178 2130 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
BRCA2P51587 IGSF1-206ENST00000370910 4406 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 NWD1-206ENST00000552788 6964 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.62□□□□□ -1.35
BRCA2P51587 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 RN7SL385P-201ENST00000468873 276 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.62□□□□□ -1.35
BRCA2P51587 RNU6-615P-201ENST00000516065 106 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 AL133406.3-201ENST00000606817 541 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 AC034229.6-201ENST00000623704 224 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 AC137056.2-201ENST00000624055 1958 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.62□□□□□ -1.35
BRCA2P51587 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
BRCA2P51587 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.62□□□□□ -1.35
BRCA2P51587 SLC35E1P1-201ENST00000419313 864 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 RN7SL738P-201ENST00000470264 297 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 PRELID3BP5-201ENST00000508612 460 ntBASIC6.62□□□□□ -1.35
BRCA2P51587 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.62□□□□□ -1.35
BRCA2P51587 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.62□□□□□ -1.35
BRCA2P51587 AL591848.4-201ENST00000567832 3472 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.61□□□□□ -1.35
BRCA2P51587 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.61□□□□□ -1.35
BRCA2P51587 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 AC127024.8-201ENST00000623719 2094 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 SCRN1-206ENST00000426154 5275 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BRCA2P51587 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 AC005297.1-201ENST00000444765 862 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 AC109481.1-201ENST00000509173 282 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 ZNF493-201ENST00000339914 1665 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 GOLGA8N-201ENST00000448387 5329 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.61□□□□□ -1.35
BRCA2P51587 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.61□□□□□ -1.35
BRCA2P51587 CSNK1G1-211ENST00000635142 5548 ntTSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 TCF20-201ENST00000335626 6237 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 HMGA1P8-201ENST00000414130 321 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 RPL37AP8-201ENST00000494116 276 ntBASIC6.61□□□□□ -1.35
BRCA2P51587 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 MYO7B-203ENST00000428314 6715 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 KIAA0319-202ENST00000430948 6620 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
BRCA2P51587 ABHD18-201ENST00000388795 5450 ntTSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.61□□□□□ -1.35
BRCA2P51587 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
BRCA2P51587 ATP5A1-202ENST00000398752 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
BRCA2P51587 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC6.6□□□□□ -1.35
BRCA2P51587 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BRCA2P51587 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
BRCA2P51587 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.6□□□□□ -1.35
BRCA2P51587 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 FO393409.1-201ENST00000399325 1372 ntBASIC6.6□□□□□ -1.35
BRCA2P51587 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.6□□□□□ -1.35
BRCA2P51587 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
BRCA2P51587 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
BRCA2P51587 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.6□□□□□ -1.35
BRCA2P51587 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 338.6 ms