Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.72□□□□□ -1.49
SRP9P49458 SLC25A51P1-201ENST00000468432 871 ntBASIC5.72□□□□□ -1.49
SRP9P49458 UOX-201ENST00000471089 899 ntBASIC5.72□□□□□ -1.49
SRP9P49458 RPL23AP68-201ENST00000480924 445 ntBASIC5.72□□□□□ -1.49
SRP9P49458 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.72□□□□□ -1.49
SRP9P49458 RN7SL143P-201ENST00000496780 297 ntBASIC5.72□□□□□ -1.49
SRP9P49458 RNA5SP96-201ENST00000516041 107 ntBASIC5.72□□□□□ -1.49
SRP9P49458 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 CHEK2P2-201ENST00000554701 672 ntBASIC5.72□□□□□ -1.49
SRP9P49458 AC091304.4-201ENST00000565703 620 ntBASIC5.72□□□□□ -1.49
SRP9P49458 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 RN7SL32P-201ENST00000580514 281 ntBASIC5.72□□□□□ -1.49
SRP9P49458 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.72□□□□□ -1.49
SRP9P49458 RPS4XP21-201ENST00000603814 750 ntBASIC5.72□□□□□ -1.49
SRP9P49458 AL137000.1-201ENST00000610528 1244 ntBASIC5.72□□□□□ -1.49
SRP9P49458 AC097641.3-201ENST00000613523 464 ntBASIC5.72□□□□□ -1.49
SRP9P49458 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.72□□□□□ -1.49
SRP9P49458 AP001153.1-201ENST00000641024 338 ntBASIC5.72□□□□□ -1.49
SRP9P49458 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SRP9P49458 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SRP9P49458 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.72□□□□□ -1.49
SRP9P49458 CASC19-228ENST00000641414 1684 ntBASIC5.72□□□□□ -1.49
SRP9P49458 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.72□□□□□ -1.49
SRP9P49458 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC5.72□□□□□ -1.49
SRP9P49458 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SRP9P49458 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SRP9P49458 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.71□□□□□ -1.49
SRP9P49458 GTF2IP4-201ENST00000453092 2054 ntBASIC5.71□□□□□ -1.49
SRP9P49458 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SRP9P49458 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.71□□□□□ -1.49
SRP9P49458 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SRP9P49458 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.71□□□□□ -1.49
SRP9P49458 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
SRP9P49458 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.71□□□□□ -1.5
SRP9P49458 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SRP9P49458 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SRP9P49458 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SRP9P49458 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SRP9P49458 SNORA70.3-201ENST00000365075 132 ntBASIC5.71□□□□□ -1.5
SRP9P49458 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.71□□□□□ -1.5
SRP9P49458 RN7SKP205-201ENST00000410999 307 ntBASIC5.71□□□□□ -1.5
SRP9P49458 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.71□□□□□ -1.5
SRP9P49458 PTPN2P1-201ENST00000423212 1072 ntBASIC5.71□□□□□ -1.5
SRP9P49458 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 RPSAP24-201ENST00000461543 873 ntBASIC5.71□□□□□ -1.5
SRP9P49458 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 MARK2P8-201ENST00000476069 952 ntBASIC5.71□□□□□ -1.5
SRP9P49458 AL390198.2-201ENST00000510553 222 ntBASIC5.71□□□□□ -1.5
SRP9P49458 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.71□□□□□ -1.5
SRP9P49458 AC007494.1-201ENST00000562293 760 ntBASIC5.71□□□□□ -1.5
SRP9P49458 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 NIFKP4-201ENST00000567275 1192 ntBASIC5.71□□□□□ -1.5
SRP9P49458 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 AP003115.1-201ENST00000569849 463 ntBASIC5.71□□□□□ -1.5
SRP9P49458 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.71□□□□□ -1.5
SRP9P49458 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.71□□□□□ -1.5
SRP9P49458 U91328.4-201ENST00000608919 517 ntBASIC5.71□□□□□ -1.5
SRP9P49458 AC006328.2-201ENST00000623198 397 ntBASIC5.71□□□□□ -1.5
SRP9P49458 AC012005.2-201ENST00000624333 397 ntBASIC5.71□□□□□ -1.5
SRP9P49458 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.71□□□□□ -1.5
SRP9P49458 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SRP9P49458 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SRP9P49458 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.71□□□□□ -1.5
SRP9P49458 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SRP9P49458 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SRP9P49458 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SRP9P49458 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SRP9P49458 SNORA38B-201ENST00000363524 131 ntBASIC5.7□□□□□ -1.5
SRP9P49458 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.7□□□□□ -1.5
SRP9P49458 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.7□□□□□ -1.5
SRP9P49458 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms