Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOBP13765 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOBP13765 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DOBP13765 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HLA-DOBP13765 AL731556.1-201ENST00000394628 3711 ntBASIC5.82□□□□□ -1.48
HLA-DOBP13765 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC010894.1-201ENST00000313760 361 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 RNU4-23P-201ENST00000362839 140 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 ARSFP1-201ENST00000398758 477 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 TRIM60P13-201ENST00000432350 1283 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 MTND2P3-201ENST00000452458 470 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 MTND3P4-201ENST00000453537 303 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 CCNJP2-201ENST00000457810 1163 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC022206.1-201ENST00000495947 347 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 MINOS1P4-201ENST00000515470 318 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC131935.1-201ENST00000524621 333 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC084337.1-201ENST00000524809 686 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC092718.4-201ENST00000566639 716 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC027796.1-201ENST00000575593 512 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC114477.1-201ENST00000605097 605 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC138473.1-201ENST00000605717 526 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 BX322635.1-201ENST00000605804 496 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC005014.3-201ENST00000605985 190 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL008582.1-201ENST00000609612 442 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 U1.41-201ENST00000617626 165 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC012254.5-201ENST00000623573 478 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 AC091948.2-201ENST00000636510 279 ntBASIC5.81□□□□□ -1.48
HLA-DOBP13765 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DOBP13765 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DOBP13765 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC022417.1-201ENST00000624768 1303 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DOBP13765 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC067942.1-201ENST00000488045 1493 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 FAM32BP-201ENST00000344033 333 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 MRPS6P2-201ENST00000381143 370 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AL050335.1-201ENST00000396909 869 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 MIR1266-201ENST00000408125 84 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 RPL23AP85-201ENST00000421838 433 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AL589794.1-201ENST00000424971 390 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 RPL31P11-202ENST00000454082 372 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC089999.1-201ENST00000460336 374 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DOBP13765 RN7SL83P-201ENST00000468131 297 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC139272.1-201ENST00000505516 640 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AP001960.1-201ENST00000506494 658 ntBASIC5.8□□□□□ -1.48
HLA-DOBP13765 AC113398.2-201ENST00000507630 558 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms