Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.19□□□□□ -1.42
SNX3O60493 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX3O60493 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC6.19□□□□□ -1.42
SNX3O60493 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX3O60493 AL049869.4-201ENST00000555669 178 ntBASIC6.19□□□□□ -1.42
SNX3O60493 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX3O60493 AC027229.1-201ENST00000583887 253 ntBASIC6.19□□□□□ -1.42
SNX3O60493 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.19□□□□□ -1.42
SNX3O60493 AP001120.4-201ENST00000590231 108 ntBASIC6.19□□□□□ -1.42
SNX3O60493 AC122710.3-201ENST00000606566 541 ntBASIC6.19□□□□□ -1.42
SNX3O60493 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.19□□□□□ -1.42
SNX3O60493 AC061999.1-201ENST00000624454 177 ntBASIC6.19□□□□□ -1.42
SNX3O60493 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX3O60493 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.19□□□□□ -1.42
SNX3O60493 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
SNX3O60493 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
SNX3O60493 GPR33-201ENST00000399285 1343 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX3O60493 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNX3O60493 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
SNX3O60493 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNX3O60493 AC004076.2-201ENST00000620532 3323 ntBASIC6.19□□□□□ -1.42
SNX3O60493 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX3O60493 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 OR5E1P-201ENST00000305754 927 ntBASIC6.18□□□□□ -1.42
SNX3O60493 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 A2ML1-AS2-201ENST00000394240 386 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
SNX3O60493 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 HNRNPA1P29-201ENST00000426409 879 ntBASIC6.18□□□□□ -1.42
SNX3O60493 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 AC009518.3-201ENST00000438972 253 ntBASIC6.18□□□□□ -1.42
SNX3O60493 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX3O60493 RN7SL390P-201ENST00000470634 284 ntBASIC6.18□□□□□ -1.42
SNX3O60493 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 TOMM22P4-201ENST00000511318 336 ntBASIC6.18□□□□□ -1.42
SNX3O60493 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX3O60493 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 RNA5SP318-201ENST00000516352 92 ntBASIC6.18□□□□□ -1.42
SNX3O60493 AC021733.2-201ENST00000518830 497 ntBASIC6.18□□□□□ -1.42
SNX3O60493 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX3O60493 RPA2P3-201ENST00000533268 770 ntBASIC6.18□□□□□ -1.42
SNX3O60493 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.18□□□□□ -1.42
SNX3O60493 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC6.18□□□□□ -1.42
SNX3O60493 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 AC245052.7-201ENST00000601161 359 ntBASIC6.18□□□□□ -1.42
SNX3O60493 AC093635.1-201ENST00000609028 555 ntBASIC6.18□□□□□ -1.42
SNX3O60493 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
SNX3O60493 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNX3O60493 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX3O60493 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 ADAM24P-201ENST00000398655 2101 ntBASIC6.17□□□□□ -1.42
SNX3O60493 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 FGL1-203ENST00000398054 1462 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SNX3O60493 RNA5SP321-201ENST00000362722 111 ntBASIC6.17□□□□□ -1.42
SNX3O60493 NPM1P37-201ENST00000403105 874 ntBASIC6.17□□□□□ -1.42
SNX3O60493 AL035696.2-201ENST00000407941 709 ntBASIC6.17□□□□□ -1.42
SNX3O60493 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX3O60493 GAPDHP33-201ENST00000443168 1013 ntBASIC6.17□□□□□ -1.42
SNX3O60493 SNRPBP1-201ENST00000443634 282 ntBASIC6.17□□□□□ -1.42
SNX3O60493 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX3O60493 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX3O60493 TRBV5-2-201ENST00000489095 273 ntBASIC6.17□□□□□ -1.42
SNX3O60493 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX3O60493 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.17□□□□□ -1.42
SNX3O60493 NDUFA3P2-201ENST00000531434 232 ntBASIC6.17□□□□□ -1.42
SNX3O60493 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX3O60493 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AC007068.2-201ENST00000543168 395 ntBASIC6.17□□□□□ -1.42
SNX3O60493 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.17□□□□□ -1.42
SNX3O60493 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.17□□□□□ -1.42
SNX3O60493 AC138123.2-204ENST00000547432 721 ntTSL 3 BASIC6.17□□□□□ -1.42
SNX3O60493 CIPC-206ENST00000555611 599 ntTSL 4 BASIC6.17□□□□□ -1.42
SNX3O60493 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC6.17□□□□□ -1.42
SNX3O60493 AP005901.4-201ENST00000577336 569 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms