Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LINC01028-201ENST00000586373 1045 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC127071.1-201ENST00000624997 712 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC073857.1-201ENST00000625082 1054 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC123769.1-201ENST00000530992 3192 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 TPTE2P2-201ENST00000403471 1466 ntBASIC7.43□□□□□ -1.22
CCDC66A2RUB6 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC66A2RUB6 MANSC1-204ENST00000545735 1501 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 TBCCD1-203ENST00000424280 3058 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC006511.3-201ENST00000624929 1783 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 RN7SKP186-201ENST00000365371 303 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 RNU6-40P-201ENST00000384254 107 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 RNU11-201ENST00000387069 134 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 OR7E91P-201ENST00000400027 866 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MIR541-201ENST00000401360 84 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 CYP2AC1P-201ENST00000407830 1173 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MIR1231-201ENST00000408101 92 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 GLS-203ENST00000409215 632 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC106883.1-201ENST00000418805 562 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MARK2P12-201ENST00000420129 585 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC01980-202ENST00000425195 491 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC00160-201ENST00000430635 693 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 PHBP4-201ENST00000437447 837 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC01747-201ENST00000437696 1067 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC004854.1-201ENST00000440356 349 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 ZNF736P8Y-201ENST00000451913 669 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 SNORA81.1-201ENST00000458922 177 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 RN7SL688P-201ENST00000471754 275 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 SNRPCP3-201ENST00000474888 476 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC112184.1-201ENST00000505179 312 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC096571.1-202ENST00000506634 735 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC090568.1-201ENST00000509499 856 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 SNORA76.2-201ENST00000517095 137 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 Y_RNA.717-201ENST00000517106 92 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC009879.1-201ENST00000520029 839 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MTND2P32-201ENST00000521584 1038 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 OR4A21P-201ENST00000532759 944 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC079866.1-201ENST00000534985 1220 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC006205.2-201ENST00000538943 373 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 KLRD1-210ENST00000543777 789 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 HIGD1AP9-201ENST00000550710 279 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC084759.1-201ENST00000561168 290 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 STARD6-204ENST00000584040 660 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC091057.3-201ENST00000602684 733 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AL360012.1-201ENST00000602813 131 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 FAM27E3-202ENST00000614611 340 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC140725.3-201ENST00000616193 880 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC068787.1-201ENST00000623908 691 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC013437.2-201ENST00000639587 677 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 PARP4P1-201ENST00000435945 2337 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC120036.2-201ENST00000509729 1474 ntBASIC7.42□□□□□ -1.22
CCDC66A2RUB6 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 Z93022.1-201ENST00000433228 1554 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC66A2RUB6 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 HSPD1P8-201ENST00000400121 1658 ntBASIC7.41□□□□□ -1.22
CCDC66A2RUB6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC66A2RUB6 RNA5SP396-201ENST00000364834 120 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms