Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 RNU1-5P-201ENST00000362684 144 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 MIR1266-201ENST00000408125 84 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC006509.1-201ENST00000420788 634 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 FAM183DP-201ENST00000421987 399 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL590128.1-201ENST00000433407 286 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC021074.2-201ENST00000468434 172 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 RPS3AP49-201ENST00000472161 790 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 PGBD4P1-201ENST00000473644 407 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 SNRPCP6-201ENST00000528310 210 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC140063.1-201ENST00000541343 259 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL136520.1-202ENST00000555494 763 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC107958.1-201ENST00000556576 290 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC013731.1-201ENST00000604340 883 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC106858.1-201ENST00000637497 429 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AL358394.2-201ENST00000427229 3637 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 MAP3K19-206ENST00000392918 1460 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
DKK3Q9UBP4 AC034229.2-201ENST00000566945 2508 ntBASIC6.84□□□□□ -1.31
DKK3Q9UBP4 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
DKK3Q9UBP4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC6.84□□□□□ -1.32
DKK3Q9UBP4 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.84□□□□□ -1.32
DKK3Q9UBP4 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.84□□□□□ -1.32
DKK3Q9UBP4 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 C2CD5-212ENST00000542676 3438 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 PCBP1-AS1-210ENST00000416395 2451 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC010894.1-201ENST00000313760 361 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SNORA70.3-201ENST00000365075 132 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 DHFRP5-201ENST00000406944 564 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CYCSP17-201ENST00000407870 315 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 Z82198.3-201ENST00000421145 199 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CDC42P6-201ENST00000421246 576 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC083855.1-201ENST00000440041 258 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AL136455.1-201ENST00000441083 1240 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 VN1R48P-201ENST00000448149 1036 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CYCSP53-201ENST00000455540 265 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 IGKV1OR22-5-201ENST00000458718 354 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 RN7SL83P-201ENST00000468131 297 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 RN7SL70P-201ENST00000478322 302 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SNRPCP11-201ENST00000492453 205 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 RN7SKP196-201ENST00000516267 345 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SNORD116-30-201ENST00000516468 85 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 RNU4-18P-201ENST00000516751 149 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC084851.2-201ENST00000530377 364 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC024405.1-201ENST00000532521 1042 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC007068.2-201ENST00000543168 395 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 CR383656.14-201ENST00000551951 406 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 GNG2-203ENST00000553432 577 ntTSL 4 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 OR4C49P-201ENST00000563891 900 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AP000919.1-201ENST00000582850 985 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.83□□□□□ -1.32
DKK3Q9UBP4 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.83□□□□□ -1.32
DKK3Q9UBP4 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms