Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC010976.1-205ENST00000596439 1007 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC024451.4-201ENST00000602578 752 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC023310.4-201ENST00000613130 650 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC139769.3-201ENST00000618383 175 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AL513321.2-202ENST00000634479 921 ntTSL 5 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC007996.1-201ENST00000620414 2821 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 MAPK10-377ENST00000642006 2752 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 P2RY14-201ENST00000309170 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 ATP2C1-208ENST00000504948 4714 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC011374.1-201ENST00000564471 1567 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 AC015871.3-201ENST00000618835 2261 ntBASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 TEKT1-201ENST00000338694 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
TRAIPQ9BWF2 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC138627.1-203ENST00000641872 1680 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 MAPK10-290ENST00000641237 2826 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC016930.1-201ENST00000468766 2205 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RN7SKP211-201ENST00000363328 315 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNU1-87P-201ENST00000363727 170 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 SNORA62.2-201ENST00000364672 152 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNA5SP355-201ENST00000365317 135 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNU6-413P-201ENST00000384115 107 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 OLA1P1-201ENST00000396387 1189 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC127537.1-201ENST00000418183 748 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 NFIA-AS2-202ENST00000421455 768 ntTSL 4 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RPS7P12-201ENST00000422385 582 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 OR7E117P-201ENST00000422682 1112 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 SNX18P3-201ENST00000424993 835 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RAC1P8-201ENST00000427086 527 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 ARL5AP2-201ENST00000444698 533 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 Z99714.1-201ENST00000450463 807 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC104389.2-201ENST00000450768 887 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC236972.4-201ENST00000458091 963 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC131233.1-201ENST00000479200 955 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC113347.3-201ENST00000509113 148 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC124293.1-201ENST00000530034 493 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AP004607.5-201ENST00000532034 217 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 MRPS21P9-201ENST00000571150 257 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC016629.2-201ENST00000597341 199 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AL390058.1-201ENST00000603834 629 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC108865.2-201ENST00000606881 432 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AC233702.2-201ENST00000618784 583 ntTSL 4 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 OR13D1-202ENST00000641530 945 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AL359922.2-201ENST00000581788 3017 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 SLC24A1-212ENST00000546330 3246 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 MSL3P1-202ENST00000440028 1468 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 RNF219-201ENST00000282003 3529 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 NLRP14-201ENST00000299481 3628 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 DDX50P1-201ENST00000438163 2400 ntBASIC8.3□□□□□ -1.08
TRAIPQ9BWF2 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TRAIPQ9BWF2 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
TRAIPQ9BWF2 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms