Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PPCS-201ENST00000372556 984 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RNU6-1055P-201ENST00000391085 107 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MRPS21P5-201ENST00000417885 231 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ST13P12-201ENST00000508958 1094 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SNX18P23-201ENST00000510867 677 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NDUFA5P11-201ENST00000567995 343 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 CD86-209ENST00000493101 1572 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 IARS-205ENST00000443024 4341 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RMST-210ENST00000640149 2844 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SNX18P25-201ENST00000510539 758 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MIR3176-201ENST00000582210 90 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 OR7E18P-201ENST00000592589 702 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 TNPO1P2-201ENST00000426249 2665 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 Z93019.1-201ENST00000416450 973 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 OSTN-AS1-201ENST00000430375 515 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC018804.1-201ENST00000430381 618 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FTH1P20-201ENST00000434913 548 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LDHAP1-201ENST00000509421 992 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC103703.1-201ENST00000634783 663 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC034229.2-201ENST00000566945 2508 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL031595.3-201ENST00000624919 14262 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PAICSP2-201ENST00000429118 1150 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RN7SL104P-201ENST00000498686 293 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC106800.2-201ENST00000514009 1103 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MAST4-IT1-201ENST00000514241 658 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PEX11A-205ENST00000561257 978 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 SAMMSON-214ENST00000641395 1264 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 AL450345.1-202ENST00000605741 3881 ntBASIC1.99□□□□□ -2.09
SYNE1Q8NF91 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC1.99□□□□□ -2.09
SYNE1Q8NF91 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYNE1Q8NF91 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SYNE1Q8NF91 RNA5SP140-201ENST00000364524 92 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 CYCSP17-201ENST00000407870 315 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 AC112492.2-201ENST00000432774 1030 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC1.98□□□□□ -2.09
SYNE1Q8NF91 NPM1P23-201ENST00000440193 849 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 PPIAP7-201ENST00000454070 489 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 AL139156.3-201ENST00000454802 394 ntBASIC1.98□□□□□ -2.09
SYNE1Q8NF91 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms