Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MTND5P20-201ENST00000448677 143 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 EPS15P1-201ENST00000448836 336 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 NPM1P9-201ENST00000453156 844 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL451074.1-202ENST00000453762 989 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC114781.4-201ENST00000513707 639 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC098827.1-201ENST00000514630 667 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RN7SKP31-201ENST00000516354 278 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 MTND6P25-201ENST00000528711 516 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AP002812.4-201ENST00000532139 286 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC005632.1-201ENST00000550637 576 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 GTF2IP8-201ENST00000560687 584 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 EIF5A2P1-201ENST00000564027 460 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 SHBG-209ENST00000572182 479 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC096708.2-201ENST00000577676 512 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RN7SL353P-201ENST00000579902 252 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 SYPL1P2-201ENST00000582878 727 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 GLUD1P2-201ENST00000583339 201 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 GLUD1P8-201ENST00000585063 203 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ZNF780B-206ENST00000598845 401 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC125494.2-201ENST00000602431 657 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 SLC25A6P5-202ENST00000602729 1038 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 C1orf186-208ENST00000603378 614 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AP001330.5-201ENST00000607176 411 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC024560.3-201ENST00000608482 349 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC079395.2-201ENST00000610982 737 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 PPARGC1A-218ENST00000617484 1026 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 Metazoa_SRP.132-201ENST00000619251 285 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC234791.1-201ENST00000620830 1203 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC073348.1-201ENST00000623002 331 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC004836.1-201ENST00000623032 634 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 C1orf137-201ENST00000624685 386 ntTSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC119674.1-212ENST00000641155 993 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL390728.4-201ENST00000421406 1465 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 OR1S1-202ENST00000641544 1474 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AL136146.1-201ENST00000529830 1667 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 COX10-AS1-201ENST00000423323 3000 ntTSL 2 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 CR383658.2-201ENST00000547576 1525 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 AC125238.2-201ENST00000430003 1440 ntBASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 RTP3-201ENST00000296142 1321 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
DEPDC4Q8N2C3 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.77□□□□□ -1.16
DEPDC4Q8N2C3 EFCAB6-203ENST00000396231 4424 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.16
DEPDC4Q8N2C3 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC011447.7-201ENST00000624228 1590 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LY75-CD302-202ENST00000505052 5482 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC02102-201ENST00000503989 3364 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ZNF192P2-201ENST00000402215 1383 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC010132.4-201ENST00000569883 1368 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 ALDOB-203ENST00000616752 1391 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC131935.2-201ENST00000623649 1371 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 VPREB1-201ENST00000302273 626 ntAPPRIS ALT2 TSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC00970-201ENST00000366408 1129 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 PAGE5-202ENST00000374952 428 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 RNU6-1263P-201ENST00000384601 106 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 TMEM139-202ENST00000409102 1226 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 FIGN-202ENST00000409634 746 ntTSL 5 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC002524.1-201ENST00000411687 547 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 MEAF6P1-201ENST00000416092 327 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC00630-202ENST00000420471 838 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 GAPDHP49-201ENST00000421421 961 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 LINC01468-202ENST00000435813 975 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC7.77□□□□□ -1.17
DEPDC4Q8N2C3 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms