Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 NDUFA3P1-201ENST00000588007 252 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC093503.1-202ENST00000598743 478 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL137190.1-201ENST00000603288 282 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL021918.1-201ENST00000603933 236 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AP003392.5-201ENST00000607857 415 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC004067.1-201ENST00000608733 700 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MIAT_exon1.1-201ENST00000617016 135 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC092794.2-201ENST00000620933 563 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC129908.1-201ENST00000624553 648 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AC116618.1-201ENST00000634617 774 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CASC19-274ENST00000642018 970 ntBASIC6.87□□□□□ -1.31
ATG4DQ86TL0 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 RPS20-205ENST00000519807 1826 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
ATG4DQ86TL0 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 EPYC-201ENST00000261172 1539 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ATP8A2P3-201ENST00000426792 1536 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TPD52-204ENST00000517427 2596 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 GABRR3-202ENST00000472788 1416 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LIN9-205ENST00000481685 1916 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 COQ3-202ENST00000369240 646 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RNU6-481P-201ENST00000384194 107 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MIR575-201ENST00000385013 94 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MIR498-201ENST00000385134 124 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TRBV28-201ENST00000390400 364 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LARP1P1-201ENST00000407692 292 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 HSPE1-202ENST00000409468 570 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC092638.1-201ENST00000411966 1275 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 IFNA12P-201ENST00000413147 571 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 GAPDHP51-201ENST00000426454 1000 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MTND1P2-201ENST00000430604 821 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC241584.1-201ENST00000438469 1241 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RHEBP1-201ENST00000448647 556 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL157777.1-201ENST00000468100 304 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RN7SL414P-201ENST00000469545 294 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 RN7SL815P-201ENST00000470970 290 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 MTND5P5-201ENST00000503764 376 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 CDC42P4-201ENST00000510507 563 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 GTF2F2P1-201ENST00000511083 675 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC116347.2-201ENST00000514912 523 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC067904.2-201ENST00000517322 1283 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC023595.1-201ENST00000536216 564 ntTSL 4 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC115676.1-201ENST00000538416 329 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AL121766.1-201ENST00000547436 487 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 NUTF2P2-201ENST00000551207 384 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 APEX1-214ENST00000557054 888 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 OR4F28P-201ENST00000559128 938 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC090415.1-201ENST00000581877 847 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC090616.1-201ENST00000583895 447 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 STARD6-204ENST00000584040 660 ntTSL 3 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC005884.1-201ENST00000588604 429 ntTSL 5 BASIC6.86□□□□□ -1.31
ATG4DQ86TL0 OR4G1P-201ENST00000588632 938 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 OR4F8P-201ENST00000589943 937 ntBASIC6.86□□□□□ -1.31
ATG4DQ86TL0 AC011509.2-201ENST00000592263 627 ntTSL 3 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms