Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 ZNF548-202ENST00000366197 4955 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 LOXHD1-207ENST00000441551 6226 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 ATF7-201ENST00000420353 6680 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 MAPK10-304ENST00000641341 3984 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 SMARCE1-202ENST00000348513 5840 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC061975.7-201ENST00000592016 2692 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC016739.1-201ENST00000405359 345 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 TNPO1P1-201ENST00000423641 1138 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 RBMY2QP-201ENST00000429799 1147 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 CEACAMP10-202ENST00000495431 496 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 RN7SL591P-201ENST00000496150 292 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 MIR4505-201ENST00000582238 73 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 AC025171.4-201ENST00000607250 1047 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 AL390318.1-201ENST00000624564 687 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 RGS6-201ENST00000343854 5342 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 BDNF-217ENST00000533131 3878 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 CSNK2A1-204ENST00000400227 1499 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 PARP4P2-201ENST00000446672 3326 ntBASIC4.96□□□□□ -1.62
VPS13CQ709C8 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 ABCC12-201ENST00000311303 5168 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 TULP4-201ENST00000367094 5170 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 LUC7L3-208ENST00000505658 7040 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.96□□□□□ -1.62
VPS13CQ709C8 AL512624.2-201ENST00000621705 2566 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VPS13CQ709C8 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 AL645937.3-201ENST00000453647 936 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 RPS27AP3-201ENST00000453803 454 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC100832.1-201ENST00000471945 383 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC105233.1-201ENST00000498840 781 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC110056.1-201ENST00000525759 911 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 HIGD1AP5-201ENST00000529959 259 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 NKD1-201ENST00000268459 17105 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 NEK2P4-201ENST00000425793 1329 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AL512310.3-201ENST00000547023 1335 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC119674.1-204ENST00000641348 1343 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 ZNF469-201ENST00000437464 13203 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 PTPRE-202ENST00000306042 4957 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 FRY-202ENST00000380250 10688 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 FRY-209ENST00000642040 10697 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 HDAC1P2-201ENST00000453661 1398 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 CBX1P5-201ENST00000475330 559 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC083795.1-201ENST00000491760 320 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 DCLK1-202ENST00000360631 8007 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 MTERF4-222ENST00000614476 4524 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 MIR765-201ENST00000390226 114 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 MIR550A3-201ENST00000390735 95 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 OR6E1P-201ENST00000414424 923 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC245047.2-201ENST00000441060 530 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AL389915.2-201ENST00000454576 441 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 SUMO2P7-201ENST00000511179 285 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 LINC02424-201ENST00000548512 1264 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 FAM25E-202ENST00000608562 189 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AC091544.5-201ENST00000620192 3815 ntBASIC4.95□□□□□ -1.62
VPS13CQ709C8 AGAP1-212ENST00000614409 9932 ntTSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 SETD5-204ENST00000406341 6582 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 NFRKB-203ENST00000524794 4351 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VPS13CQ709C8 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VPS13CQ709C8 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
VPS13CQ709C8 RN7SKP125-201ENST00000410481 302 ntBASIC4.94□□□□□ -1.62
VPS13CQ709C8 NENFP1-201ENST00000419476 466 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms