Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC128716.1-201ENST00000475129 166 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC138517.1-201ENST00000515724 568 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 MIR3157-201ENST00000578688 85 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC015819.1-201ENST00000613588 663 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 TEX41-255ENST00000626404 610 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 PSMC1P4-201ENST00000515236 1327 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 LINC02318-201ENST00000553785 1334 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC090220.1-201ENST00000593078 1699 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC007012.2-201ENST00000623206 1676 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 AC006600.2-201ENST00000624834 2506 ntBASIC6.14□□□□□ -1.43
RTL4Q6ZR62 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 RNA5SP514-201ENST00000363717 111 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 RN7SKP188-201ENST00000410789 317 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 RPL23AP18-201ENST00000416139 468 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 GAPDHP37-201ENST00000442317 968 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC133965.1-201ENST00000452984 354 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC099670.1-201ENST00000455141 783 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC044810.1-201ENST00000480271 711 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 OR52H2P-201ENST00000514607 902 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AP003080.1-202ENST00000526526 915 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC093635.1-201ENST00000609028 555 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AP003789.1-201ENST00000617737 605 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 SMG1P5-202ENST00000529428 4219 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 SMG1P2-201ENST00000566127 4221 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC022905.1-201ENST00000503430 3048 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 AC140479.2-201ENST00000421567 3130 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 RACGAP1P-201ENST00000550663 1879 ntBASIC6.13□□□□□ -1.43
RTL4Q6ZR62 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTL4Q6ZR62 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.12□□□□□ -1.43
RTL4Q6ZR62 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL4Q6ZR62 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms