Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 AC022415.1-202ENST00000486612 523 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 AL078623.1-201ENST00000602702 907 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 AL589743.6-201ENST00000611025 117 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 LINC02495-203ENST00000636704 242 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.79□□□□□ -1.48
H3F3AP84243 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
H3F3AP84243 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.78□□□□□ -1.48
H3F3AP84243 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 SAGE3P-201ENST00000619800 1635 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 CCAT2-201ENST00000630920 1752 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
H3F3AP84243 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.78□□□□□ -1.48
H3F3AP84243 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
H3F3AP84243 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 AL133260.1-201ENST00000405720 405 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 RPL23AP18-201ENST00000416139 468 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
H3F3AP84243 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 AL356121.1-201ENST00000442911 156 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.78□□□□□ -1.48
H3F3AP84243 AC091965.3-201ENST00000506236 208 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.78□□□□□ -1.48
H3F3AP84243 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5.78□□□□□ -1.48
H3F3AP84243 ARGFXP2-201ENST00000579304 949 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 RN7SL66P-201ENST00000582099 264 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 AC090616.1-201ENST00000583895 447 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 MIR212-201ENST00000586026 110 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.78□□□□□ -1.48
H3F3AP84243 AL352984.2-201ENST00000611153 546 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 AC005618.1-201ENST00000606901 3148 ntBASIC5.78□□□□□ -1.48
H3F3AP84243 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.78□□□□□ -1.48
H3F3AP84243 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.78□□□□□ -1.48
H3F3AP84243 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
H3F3AP84243 AL353743.3-201ENST00000442109 1468 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3AP84243 AC110373.1-201ENST00000505994 3505 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
H3F3AP84243 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
H3F3AP84243 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 STAG3L4-201ENST00000352103 530 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 AL034417.1-201ENST00000399343 800 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 Z82198.3-201ENST00000421145 199 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 GPN3P1-201ENST00000423883 535 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.77□□□□□ -1.49
H3F3AP84243 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3AP84243 CCNJP2-201ENST00000457810 1163 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3AP84243 AC022206.1-201ENST00000495947 347 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3AP84243 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
H3F3AP84243 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3AP84243 KCTD9P4-201ENST00000526766 1166 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.77□□□□□ -1.49
H3F3AP84243 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.77□□□□□ -1.49
H3F3AP84243 AC023968.1-201ENST00000560719 475 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AC025283.1-201ENST00000572039 734 ntBASIC5.77□□□□□ -1.49
H3F3AP84243 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms