Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SEC61A1P61619 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SEC61A1P61619 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.83□□□□□ -1.48
SEC61A1P61619 LRFN5-203ENST00000554120 2121 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SEC61A1P61619 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A1P61619 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SEC61A1P61619 TRIM53CP-201ENST00000531490 1354 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AL451046.1-201ENST00000406097 534 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 RN7SKP148-201ENST00000410179 275 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 MTND2P15-201ENST00000418575 892 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 AL021707.2-202ENST00000422408 1080 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC007365.2-201ENST00000428806 458 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 NPM1P48-201ENST00000436002 853 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC083855.1-201ENST00000440041 258 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 HMGN1P32-201ENST00000441744 256 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC010878.1-201ENST00000456500 1047 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC096743.1-201ENST00000485172 319 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 AGGF1P3-201ENST00000493675 1213 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 RN7SKP11-201ENST00000517018 287 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 OR4A46P-201ENST00000527255 933 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 OR4A13P-201ENST00000529316 942 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 RN7SL199P-201ENST00000578752 281 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 RN7SL656P-201ENST00000579044 281 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 MIR4312-201ENST00000579909 76 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 RN7SL404P-201ENST00000582421 281 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AL359704.2-201ENST00000604335 521 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC016542.1-201ENST00000608259 493 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 AC253576.2-201ENST00000618815 580 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC005899.6-201ENST00000620729 297 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
SEC61A1P61619 AC009220.2-201ENST00000489759 1751 ntBASIC5.82□□□□□ -1.48
SEC61A1P61619 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SEC61A1P61619 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
SEC61A1P61619 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SEC61A1P61619 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SEC61A1P61619 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AL672212.1-201ENST00000422246 400 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.81□□□□□ -1.48
SEC61A1P61619 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A1P61619 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC5.81□□□□□ -1.48
SEC61A1P61619 KATNBL1P2-201ENST00000433311 835 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A1P61619 LINC01393-202ENST00000435981 1187 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SEC61A1P61619 PSMD8P1-201ENST00000436275 769 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 LSM3P3-201ENST00000436601 306 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 BMS1P11-201ENST00000442351 885 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.81□□□□□ -1.48
SEC61A1P61619 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC5.81□□□□□ -1.48
SEC61A1P61619 BMS1P9-201ENST00000457640 885 ntBASIC5.81□□□□□ -1.48
SEC61A1P61619 BX323845.2-201ENST00000458382 234 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms