Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL163051.2-201ENST00000618976 735 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AC087894.3-201ENST00000623682 349 ntBASIC5.88□□□□□ -1.47
SOX2P48431 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.88□□□□□ -1.47
SOX2P48431 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.88□□□□□ -1.47
SOX2P48431 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 AL512329.1-201ENST00000404600 1592 ntBASIC5.88□□□□□ -1.47
SOX2P48431 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX2P48431 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.88□□□□□ -1.47
SOX2P48431 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX2P48431 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
SOX2P48431 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
SOX2P48431 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX2P48431 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
SOX2P48431 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX2P48431 MIR128-2-201ENST00000384893 84 ntBASIC5.87□□□□□ -1.47
SOX2P48431 RPS3AP5-201ENST00000389400 821 ntBASIC5.87□□□□□ -1.47
SOX2P48431 MTATP6P31-201ENST00000406985 692 ntBASIC5.87□□□□□ -1.47
SOX2P48431 RNA5SP177-201ENST00000410122 107 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC5.87□□□□□ -1.47
SOX2P48431 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX2P48431 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 AC134879.1-201ENST00000426062 394 ntBASIC5.87□□□□□ -1.47
SOX2P48431 RNF19BPX-201ENST00000426224 625 ntBASIC5.87□□□□□ -1.47
SOX2P48431 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX2P48431 SLC8A1-AS1-207ENST00000444629 935 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX2P48431 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.87□□□□□ -1.47
SOX2P48431 GAPDHP53-201ENST00000458397 924 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC108729.1-201ENST00000487812 947 ntBASIC5.87□□□□□ -1.47
SOX2P48431 PCNAP1-201ENST00000505363 709 ntBASIC5.87□□□□□ -1.47
SOX2P48431 RNU6-491P-201ENST00000516099 110 ntBASIC5.87□□□□□ -1.47
SOX2P48431 OR4V1P-201ENST00000525394 1140 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC021820.1-201ENST00000525564 808 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX2P48431 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC5.87□□□□□ -1.47
SOX2P48431 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX2P48431 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX2P48431 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC5.87□□□□□ -1.47
SOX2P48431 AC011447.2-201ENST00000592921 283 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC090912.3-201ENST00000609775 533 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC097641.3-201ENST00000613523 464 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC245407.2-201ENST00000614199 451 ntBASIC5.87□□□□□ -1.47
SOX2P48431 CNTNAP3P1-201ENST00000616657 906 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AC005393.1-201ENST00000617916 584 ntBASIC5.87□□□□□ -1.47
SOX2P48431 AP000577.1-201ENST00000624366 878 ntBASIC5.87□□□□□ -1.47
SOX2P48431 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX2P48431 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 GPR1-203ENST00000437420 1557 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.87□□□□□ -1.47
SOX2P48431 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 NDC80-201ENST00000261597 2172 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SOX2P48431 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 AL731556.1-201ENST00000394628 3711 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 AP004289.1-201ENST00000436307 2205 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC139426.3-201ENST00000605648 2059 ntBASIC5.86□□□□□ -1.47
SOX2P48431 CUBNP3-201ENST00000457461 1784 ntBASIC5.86□□□□□ -1.47
SOX2P48431 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 AC102941.1-201ENST00000567616 1537 ntBASIC5.86□□□□□ -1.47
SOX2P48431 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 SNORD51.1-201ENST00000365405 77 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX2P48431 AL663061.1-201ENST00000416625 580 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SOX2P48431 AC093107.1-201ENST00000422772 609 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 AC007365.2-201ENST00000428806 458 ntBASIC5.86□□□□□ -1.47
SOX2P48431 VDAC2P3-201ENST00000430995 828 ntBASIC5.86□□□□□ -1.47
SOX2P48431 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SOX2P48431 MED28P4-201ENST00000433137 572 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.86□□□□□ -1.47
SOX2P48431 GOT2P2-201ENST00000450663 1251 ntBASIC5.86□□□□□ -1.47
SOX2P48431 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC5.86□□□□□ -1.47
SOX2P48431 AC019080.2-201ENST00000453859 394 ntBASIC5.86□□□□□ -1.47
SOX2P48431 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms