Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC114477.1-201ENST00000605097 605 ntBASIC6.1□□□□□ -1.43
SOX3P41225 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.1□□□□□ -1.43
SOX3P41225 AC092683.1-202ENST00000620023 754 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX3P41225 AC159540.2-201ENST00000621110 754 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX3P41225 AC018659.2-201ENST00000624690 715 ntBASIC6.1□□□□□ -1.43
SOX3P41225 AC073488.9-201ENST00000631601 754 ntBASIC6.1□□□□□ -1.43
SOX3P41225 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 CUBNP3-201ENST00000457461 1784 ntBASIC6.1□□□□□ -1.43
SOX3P41225 MAPK10-357ENST00000641831 2858 ntBASIC6.1□□□□□ -1.43
SOX3P41225 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.1□□□□□ -1.43
SOX3P41225 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.1□□□□□ -1.43
SOX3P41225 DOCK11P1-201ENST00000553480 5932 ntBASIC6.1□□□□□ -1.43
SOX3P41225 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SOX3P41225 AC105749.1-201ENST00000631338 2008 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX3P41225 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 AC010329.1-201ENST00000593903 8328 ntBASIC6.09□□□□□ -1.43
SOX3P41225 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
SOX3P41225 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 AP003486.1-201ENST00000525716 3994 ntBASIC6.09□□□□□ -1.43
SOX3P41225 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX3P41225 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 AC121334.1-201ENST00000396414 802 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AL133260.1-201ENST00000405720 405 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AL049697.3-201ENST00000406493 982 ntBASIC6.09□□□□□ -1.43
SOX3P41225 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX3P41225 OR6R1P-201ENST00000431838 940 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SOX3P41225 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 AC234771.2-201ENST00000445718 597 ntBASIC6.09□□□□□ -1.43
SOX3P41225 CCNJP1-201ENST00000450600 1149 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AL139156.3-201ENST00000454802 394 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AC005165.2-201ENST00000466070 380 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 AC116917.1-201ENST00000520558 305 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX3P41225 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 AC092718.4-201ENST00000566639 716 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AC106785.4-201ENST00000569492 412 ntBASIC6.09□□□□□ -1.43
SOX3P41225 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX3P41225 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC6.09□□□□□ -1.43
SOX3P41225 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.09□□□□□ -1.43
SOX3P41225 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.09□□□□□ -1.43
SOX3P41225 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SOX3P41225 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
SOX3P41225 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SOX3P41225 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX3P41225 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX3P41225 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX3P41225 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
SOX3P41225 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
SOX3P41225 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX3P41225 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 MTND5P12-201ENST00000502851 1449 ntBASIC6.08□□□□□ -1.44
SOX3P41225 MTCO1P25-201ENST00000414449 1799 ntBASIC6.08□□□□□ -1.44
SOX3P41225 AC006511.3-201ENST00000624929 1783 ntBASIC6.08□□□□□ -1.44
SOX3P41225 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 STAG3L4-201ENST00000352103 530 ntBASIC6.08□□□□□ -1.44
SOX3P41225 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SOX3P41225 VIM2P-201ENST00000402383 1294 ntBASIC6.08□□□□□ -1.44
SOX3P41225 RPL7AP51-201ENST00000422016 760 ntBASIC6.08□□□□□ -1.44
SOX3P41225 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.08□□□□□ -1.44
SOX3P41225 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.08□□□□□ -1.44
SOX3P41225 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC6.08□□□□□ -1.44
SOX3P41225 AL645939.3-201ENST00000435408 225 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms