Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AC018717.1-201ENST00000457712 1505 ntBASIC8.84□□□□□ -0.99
RXRBP28702 PCDH9-202ENST00000377865 5709 ntAPPRIS P4 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 AC087501.5-201ENST00000607496 2374 ntBASIC8.84□□□□□ -0.99
RXRBP28702 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
RXRBP28702 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC8.83□□□□□ -1
RXRBP28702 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 OR7E25P-202ENST00000641088 5937 ntBASIC8.83□□□□□ -1
RXRBP28702 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 DOCK5-201ENST00000276440 10075 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 SNORA38B-201ENST00000363524 131 ntBASIC8.83□□□□□ -1
RXRBP28702 RN7SKP160-201ENST00000363804 340 ntBASIC8.83□□□□□ -1
RXRBP28702 SNORA70-201ENST00000384436 135 ntBASIC8.83□□□□□ -1
RXRBP28702 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC8.83□□□□□ -1
RXRBP28702 MIR1272-201ENST00000408106 129 ntBASIC8.83□□□□□ -1
RXRBP28702 DPPA2P3-201ENST00000411853 655 ntBASIC8.83□□□□□ -1
RXRBP28702 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC8.83□□□□□ -1
RXRBP28702 NFYAP1-201ENST00000431953 972 ntBASIC8.83□□□□□ -1
RXRBP28702 MTND4P32-201ENST00000437189 1237 ntBASIC8.83□□□□□ -1
RXRBP28702 PTMAP6-201ENST00000439110 327 ntBASIC8.83□□□□□ -1
RXRBP28702 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC8.83□□□□□ -1
RXRBP28702 PSMA6P2-201ENST00000457574 686 ntBASIC8.83□□□□□ -1
RXRBP28702 AC083806.1-201ENST00000468934 316 ntBASIC8.83□□□□□ -1
RXRBP28702 H3F3AP3-201ENST00000497682 407 ntBASIC8.83□□□□□ -1
RXRBP28702 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC8.83□□□□□ -1
RXRBP28702 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC8.83□□□□□ -1
RXRBP28702 AL022161.1-201ENST00000604390 213 ntBASIC8.83□□□□□ -1
RXRBP28702 PPATP2-201ENST00000605635 508 ntBASIC8.83□□□□□ -1
RXRBP28702 AC016405.2-201ENST00000607393 312 ntBASIC8.83□□□□□ -1
RXRBP28702 AP002967.1-201ENST00000624203 539 ntBASIC8.83□□□□□ -1
RXRBP28702 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.83□□□□□ -1
RXRBP28702 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
RXRBP28702 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC8.83□□□□□ -1
RXRBP28702 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC8.83□□□□□ -1
RXRBP28702 SLC9A6-213ENST00000637234 4691 ntTSL 5 BASIC8.83□□□□□ -1
RXRBP28702 TCL6-201ENST00000352367 3398 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.82□□□□□ -1
RXRBP28702 CEACAM5-210ENST00000617332 2228 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 DGKB-206ENST00000407950 3651 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 LAX1-203ENST00000442561 3023 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 SNHG14-226ENST00000640631 13074 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
RXRBP28702 FTO-203ENST00000460382 1517 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC8.82□□□□□ -1
RXRBP28702 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC8.82□□□□□ -1
RXRBP28702 RNA5SP273-201ENST00000362484 113 ntBASIC8.82□□□□□ -1
RXRBP28702 RNA5SP172-201ENST00000365061 118 ntBASIC8.82□□□□□ -1
RXRBP28702 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 PPCS-201ENST00000372556 984 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 SNORD116-2-201ENST00000384274 95 ntBASIC8.82□□□□□ -1
RXRBP28702 SNORD116-6-201ENST00000384711 96 ntBASIC8.82□□□□□ -1
RXRBP28702 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 CYCSP17-201ENST00000407870 315 ntBASIC8.82□□□□□ -1
RXRBP28702 DHFRP2-201ENST00000414224 547 ntBASIC8.82□□□□□ -1
RXRBP28702 SDHDP6-201ENST00000414693 480 ntBASIC8.82□□□□□ -1
RXRBP28702 ZNF736P7Y-201ENST00000425158 820 ntBASIC8.82□□□□□ -1
RXRBP28702 AC092648.1-201ENST00000425870 423 ntBASIC8.82□□□□□ -1
RXRBP28702 FAR1P1-201ENST00000427163 934 ntBASIC8.82□□□□□ -1
RXRBP28702 AC094019.1-201ENST00000434678 472 ntBASIC8.82□□□□□ -1
RXRBP28702 RPS10P20-201ENST00000494130 463 ntBASIC8.82□□□□□ -1
RXRBP28702 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.82□□□□□ -1
RXRBP28702 AP001922.2-201ENST00000530435 390 ntTSL 3 BASIC8.82□□□□□ -1
RXRBP28702 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 AC006116.7-201ENST00000590141 756 ntBASIC8.82□□□□□ -1
RXRBP28702 AC091057.3-201ENST00000602684 733 ntBASIC8.82□□□□□ -1
RXRBP28702 DUXAP3-201ENST00000603616 594 ntBASIC8.82□□□□□ -1
RXRBP28702 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC8.82□□□□□ -1
RXRBP28702 GMCL1P2-201ENST00000605230 823 ntBASIC8.82□□□□□ -1
RXRBP28702 AC012557.1-201ENST00000607115 611 ntBASIC8.82□□□□□ -1
RXRBP28702 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 AL138955.1-201ENST00000622881 1040 ntBASIC8.82□□□□□ -1
RXRBP28702 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC8.82□□□□□ -1
RXRBP28702 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC8.82□□□□□ -1
RXRBP28702 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC8.82□□□□□ -1
RXRBP28702 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
RXRBP28702 KARSP2-201ENST00000415696 1639 ntBASIC8.82□□□□□ -1
RXRBP28702 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC8.82□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms