Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC8.25□□□□□ -1.09
VARSP26640 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC8.25□□□□□ -1.09
VARSP26640 RPL5P24-201ENST00000463742 885 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC8.25□□□□□ -1.09
VARSP26640 HMGN1P13-201ENST00000505795 138 ntBASIC8.25□□□□□ -1.09
VARSP26640 OR7E85P-201ENST00000512164 985 ntBASIC8.25□□□□□ -1.09
VARSP26640 ALG1L12P-201ENST00000515046 434 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC109588.1-202ENST00000515720 880 ntTSL 3 BASIC8.25□□□□□ -1.09
VARSP26640 RNU6-1045P-201ENST00000516321 107 ntBASIC8.25□□□□□ -1.09
VARSP26640 RNA5SP460-201ENST00000516789 100 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC091820.2-201ENST00000521697 523 ntTSL 4 BASIC8.25□□□□□ -1.09
VARSP26640 AP003354.1-201ENST00000523791 533 ntTSL 2 BASIC8.25□□□□□ -1.09
VARSP26640 AP000662.1-201ENST00000530952 487 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 DDIT3-205ENST00000552740 951 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
VARSP26640 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC8.25□□□□□ -1.09
VARSP26640 AL133457.1-201ENST00000564251 987 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC005828.5-201ENST00000582741 355 ntTSL 4 BASIC8.25□□□□□ -1.09
VARSP26640 PINLYP-206ENST00000599207 712 ntAPPRIS ALT2 TSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 BNIP3P11-201ENST00000603878 563 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC013553.2-201ENST00000604244 589 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC009220.3-201ENST00000604318 586 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC019193.2-201ENST00000610012 634 ntBASIC8.25□□□□□ -1.09
VARSP26640 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
VARSP26640 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC8.25□□□□□ -1.09
VARSP26640 AC124864.2-201ENST00000624736 186 ntBASIC8.25□□□□□ -1.09
VARSP26640 PGAM1P5-203ENST00000626376 313 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 AC012560.1-201ENST00000634930 459 ntTSL 3 BASIC8.25□□□□□ -1.09
VARSP26640 CU638689.4-201ENST00000623047 5990 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 TNPO3-201ENST00000265388 4153 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARSP26640 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARSP26640 AC021683.2-203ENST00000591283 4902 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARSP26640 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 IMMT-201ENST00000254636 2613 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
VARSP26640 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
VARSP26640 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.25□□□□□ -1.09
VARSP26640 FRG2-201ENST00000378763 2084 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
VARSP26640 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC8.25□□□□□ -1.09
VARSP26640 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 PABPC5-201ENST00000312600 3221 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 AC023818.2-201ENST00000623817 2304 ntBASIC8.24□□□□□ -1.09
VARSP26640 CCR9-201ENST00000355983 2653 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 LINC00837-201ENST00000443246 3991 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 SUGT1P3-201ENST00000304932 1051 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 RNA5SP141-201ENST00000364543 120 ntBASIC8.24□□□□□ -1.09
VARSP26640 Y_RNA.529-201ENST00000384586 119 ntBASIC8.24□□□□□ -1.09
VARSP26640 CRYGS-202ENST00000392499 1132 ntAPPRIS P1 TSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 AC007068.1-201ENST00000396690 844 ntBASIC8.24□□□□□ -1.09
VARSP26640 PPP1R7-204ENST00000402734 883 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 RPS7-204ENST00000407445 833 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 AC064874.1-201ENST00000409661 441 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 AC009319.1-201ENST00000411493 754 ntBASIC8.24□□□□□ -1.09
VARSP26640 VN1R36P-201ENST00000414936 291 ntBASIC8.24□□□□□ -1.09
VARSP26640 AC007422.2-201ENST00000419809 167 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 AC073342.1-201ENST00000427392 592 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 ATP5G1P5-201ENST00000429024 411 ntBASIC8.24□□□□□ -1.09
VARSP26640 HSPD1P12-201ENST00000429127 1069 ntBASIC8.24□□□□□ -1.09
VARSP26640 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 ZYG11AP1-201ENST00000430329 837 ntBASIC8.24□□□□□ -1.09
VARSP26640 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 PA2G4P6-201ENST00000438325 1197 ntBASIC8.24□□□□□ -1.09
VARSP26640 AC242426.2-201ENST00000446956 795 ntBASIC8.24□□□□□ -1.09
VARSP26640 AL392003.2-201ENST00000451015 679 ntBASIC8.24□□□□□ -1.09
VARSP26640 AL353194.1-201ENST00000451507 441 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 LINC01795-201ENST00000454367 813 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 CDKN2AIPNLP1-201ENST00000460287 302 ntBASIC8.24□□□□□ -1.09
VARSP26640 AC087501.2-201ENST00000466869 581 ntBASIC8.24□□□□□ -1.09
VARSP26640 THUMPD3-AS1-205ENST00000481221 683 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC8.24□□□□□ -1.09
VARSP26640 BX293995.1-201ENST00000502880 755 ntBASIC8.24□□□□□ -1.09
VARSP26640 AC112184.1-201ENST00000505179 312 ntBASIC8.24□□□□□ -1.09
VARSP26640 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 RNU6-327P-201ENST00000516270 127 ntBASIC8.24□□□□□ -1.09
VARSP26640 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC8.24□□□□□ -1.09
VARSP26640 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC8.24□□□□□ -1.09
VARSP26640 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
VARSP26640 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 LINC02134-201ENST00000562980 557 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC8.24□□□□□ -1.09
VARSP26640 LINC01572-204ENST00000570035 831 ntTSL 3 BASIC8.24□□□□□ -1.09
VARSP26640 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC8.24□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms