Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 NAPA-AS1-202ENST00000594367 630 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC020914.7-201ENST00000594477 545 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RPL7AP69-201ENST00000595306 806 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AL133406.3-201ENST00000606817 541 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC010632.3-201ENST00000611377 369 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 MIR6777-201ENST00000613934 66 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC025574.2-201ENST00000615621 514 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC005277.2-201ENST00000617898 390 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AP005212.3-201ENST00000619964 528 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC074140.1-201ENST00000621617 208 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AQP4-AS1-206ENST00000628174 919 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC073488.6-201ENST00000632293 754 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 KARSP1-201ENST00000451871 1752 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 GLRA3-202ENST00000340217 3065 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 DDX18P6-201ENST00000450119 1997 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 FCGR3B-204ENST00000531221 1339 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AP001273.1-201ENST00000624493 3152 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AP004607.3-201ENST00000530354 3915 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 CDY19P-201ENST00000411668 1613 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 SGMS1-201ENST00000361543 1096 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RNU1-55P-201ENST00000365510 158 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC093392.1-201ENST00000366280 340 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 BEND6-201ENST00000370745 579 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 MIR637-201ENST00000385000 99 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 SNORA74B-201ENST00000391100 201 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 SNORA77.2-201ENST00000408571 112 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 LINC00159-202ENST00000414877 428 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC020983.1-201ENST00000417063 543 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 HMGA1P2-201ENST00000430198 324 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 GAPDHP19-201ENST00000431768 1005 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 ADI1P1-201ENST00000438914 538 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 MDC1-AS1-201ENST00000442150 738 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC245291.3-201ENST00000443400 292 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC234771.2-201ENST00000445718 597 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AL451081.2-201ENST00000448115 933 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RPL7L1P1-201ENST00000448259 785 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC013264.1-201ENST00000449346 455 ntTSL 2 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC245028.2-201ENST00000458673 253 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SL400P-201ENST00000473634 296 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RPSAP38-201ENST00000475442 881 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SL687P-201ENST00000480496 285 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SL584P-201ENST00000492309 297 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 LINC02058-201ENST00000507491 707 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 GAPDHP62-201ENST00000515313 990 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 RNA5-8SP6-201ENST00000515896 152 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC124891.1-201ENST00000536322 519 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC007537.1-201ENST00000539347 327 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AP000619.1-201ENST00000540293 1000 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AL355076.3-201ENST00000555838 587 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 CMC2-223ENST00000570195 871 ntTSL 3 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AL139220.2-217ENST00000609027 940 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC3.13□□□□□ -1.91
LINC01558Q9Y6Z2 CCL4L2-211ENST00000613173 741 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms