Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC010320.5-201ENST00000619124 676 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC106782.7-201ENST00000624024 418 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC133555.5-201ENST00000624430 418 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 OR5AU1-204ENST00000641822 1197 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 Z95114.1-201ENST00000624264 14574 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.23□□□□□ -1.57
RCL1Q9Y2P8 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RNA5SP114-201ENST00000363780 113 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 OR7E91P-201ENST00000400027 866 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC015977.1-201ENST00000418887 292 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 SNRPEP5-201ENST00000425442 278 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PRPS1P2-201ENST00000430496 937 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 ANXA2P2-201ENST00000435128 1020 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AL390879.1-201ENST00000439143 386 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RPL26P30-201ENST00000453533 435 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RPS27AP3-201ENST00000453803 454 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC004692.1-201ENST00000455430 424 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RN7SL282P-201ENST00000479676 297 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RN7SL314P-201ENST00000490735 292 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AL035690.1-201ENST00000490892 383 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RN7SL182P-201ENST00000496499 300 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 OR52H2P-201ENST00000514607 902 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AL445383.1-201ENST00000554689 874 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RN7SL689P-201ENST00000577215 297 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 GLYATL1P2-202ENST00000588046 902 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AL049829.3-202ENST00000604278 711 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC122710.3-201ENST00000606566 541 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AL021368.3-201ENST00000607119 578 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC012640.3-201ENST00000607847 430 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 Metazoa_SRP.189-201ENST00000614219 303 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC022164.1-201ENST00000568767 2673 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 AC125238.2-201ENST00000430003 1440 ntBASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
RCL1Q9Y2P8 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.57
RCL1Q9Y2P8 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RCL1Q9Y2P8 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
RCL1Q9Y2P8 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RCL1Q9Y2P8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
RCL1Q9Y2P8 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RCL1Q9Y2P8 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms