Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 RNU6-233P-201ENST00000410845 141 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 RNA5SP115-201ENST00000411160 107 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 SETP9-201ENST00000423837 832 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 KCTD9P1-201ENST00000430462 1167 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 LSM3P3-201ENST00000436601 306 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC093166.3-201ENST00000448785 303 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC114982.2-201ENST00000461396 358 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 RN7SL379P-201ENST00000479912 293 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 TOMM20P1-201ENST00000534518 427 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC027288.1-201ENST00000548359 816 ntTSL 3 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC005519.1-201ENST00000554490 601 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 NDUFA5P11-201ENST00000567995 343 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 AL138960.1-201ENST00000613838 513 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 MIR1910-201ENST00000636955 80 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 CASC19-274ENST00000642018 970 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 TMCC1P1-201ENST00000518897 1980 ntBASIC6.58□□□□□ -1.36
SATB2Q9UPW6 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SATB2Q9UPW6 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC110597.1-201ENST00000562669 3176 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 API5P1-201ENST00000424316 1510 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 RNA5SP172-201ENST00000365061 118 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 RNA5SP122-201ENST00000384457 108 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AL391419.1-201ENST00000398901 1275 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 RPSAP40-201ENST00000442343 891 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC099340.1-201ENST00000475247 599 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 FXNP1-201ENST00000555153 337 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 ADAM3B-201ENST00000569937 840 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC011921.2-201ENST00000589465 152 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC125494.2-201ENST00000602431 657 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AC004241.2-201ENST00000614562 444 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 AP001153.1-201ENST00000641024 338 ntBASIC6.57□□□□□ -1.36
SATB2Q9UPW6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SATB2Q9UPW6 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
SATB2Q9UPW6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms