Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AL512329.1-201ENST00000404600 1592 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RN7SKP189-201ENST00000365042 330 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RNA5SP176-201ENST00000390956 110 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 DNASE1L3-201ENST00000394549 1294 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 PAICSP2-201ENST00000429118 1150 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AL645936.2-201ENST00000430565 928 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 LDHAP2-201ENST00000437325 985 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RPS10P14-201ENST00000440748 502 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC079922.1-201ENST00000443291 359 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MEF2AP1-201ENST00000454867 863 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RN7SL390P-201ENST00000470634 284 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RN7SL654P-201ENST00000479178 292 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC105391.1-201ENST00000503155 1045 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC021146.11-201ENST00000503319 491 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 SNX18P23-201ENST00000510867 677 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MIR378C-201ENST00000578683 81 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RN7SL131P-201ENST00000579043 256 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 RPS27AP19-201ENST00000597285 458 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MRPL57P3-201ENST00000619218 176 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AC017037.4-201ENST00000624526 826 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 AL132640.3-201ENST00000630473 177 ntBASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
CCNB1IP1Q9NPC3 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 GMFG-201ENST00000253054 616 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 GNG5P2-201ENST00000372054 207 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 NALCN-202ENST00000376200 1126 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MIR99A-201ENST00000384906 81 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AL121835.1-201ENST00000404250 354 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 PPIAP23-201ENST00000420099 497 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MTND1P10-201ENST00000426108 832 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 SUMO2P8-201ENST00000434672 286 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC009963.4-201ENST00000448535 339 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 PPIAP6-201ENST00000557078 499 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 OR4H6P-201ENST00000563771 921 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC068152.1-203ENST00000570314 254 ntTSL 3 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 OOSP1P2-201ENST00000579644 351 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AP001267.4-201ENST00000602598 545 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AL356986.1-201ENST00000604085 341 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MIR8082-201ENST00000612488 81 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC135068.11-201ENST00000636378 921 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC005261.2-201ENST00000593427 4258 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 AC074141.1-201ENST00000588129 2995 ntBASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CCNB1IP1Q9NPC3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms