Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC073263.3-201ENST00000624449 858 ntBASIC5.68□□□□□ -1.5
SSX3Q99909 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.68□□□□□ -1.5
SSX3Q99909 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SSX3Q99909 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 LDHA-206ENST00000430553 1310 ntTSL 2 BASIC5.68□□□□□ -1.5
SSX3Q99909 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC5.68□□□□□ -1.5
SSX3Q99909 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SSX3Q99909 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AL353763.1-201ENST00000624467 1628 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX3Q99909 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.67□□□□□ -1.5
SSX3Q99909 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
SSX3Q99909 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX3Q99909 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 HESX1-201ENST00000295934 981 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 RN7SKP107-201ENST00000364157 290 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 MIR99A-201ENST00000384906 81 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 CDY17P-201ENST00000414121 1282 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 DPPA2P2-201ENST00000418220 897 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 REREP1Y-201ENST00000422655 198 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 LINC00462-201ENST00000425350 962 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 CHCHD3P1-201ENST00000425516 676 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 CDY8P-201ENST00000428380 1279 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 E2F6P1-201ENST00000428850 745 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AL604028.2-201ENST00000437848 788 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 REREP2Y-201ENST00000439103 200 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 CFLAR-212ENST00000440180 1198 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 CDY20P-201ENST00000447528 1279 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC022730.1-201ENST00000473114 568 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 RPL23AP8-201ENST00000479812 475 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 RN7SL267P-201ENST00000485107 261 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SSX3Q99909 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC5.67□□□□□ -1.5
SSX3Q99909 IGLC4-201ENST00000517690 248 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 ETFBKMT-204ENST00000538391 1067 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC069240.2-201ENST00000550242 609 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AC010287.1-201ENST00000566916 357 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 LINC01919-203ENST00000581198 598 ntTSL 3 BASIC5.67□□□□□ -1.5
SSX3Q99909 MIR4428-201ENST00000584884 73 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AC011447.2-201ENST00000592921 283 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC034229.6-201ENST00000623704 224 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 AC135068.11-201ENST00000636378 921 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SSX3Q99909 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 AL358913.2-201ENST00000553881 1548 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX3Q99909 NLRP3P1-201ENST00000622303 1785 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 UGT2B24P-201ENST00000514441 1597 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC5.67□□□□□ -1.5
SSX3Q99909 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 RNGTT-203ENST00000538899 1374 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
SSX3Q99909 NAMPTP1-201ENST00000440465 2514 ntBASIC5.67□□□□□ -1.5
SSX3Q99909 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SSX3Q99909 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms