Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CDK5RAP3Q96JB5 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 AL078595.2-201ENST00000605309 1780 ntBASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CDK5RAP3Q96JB5 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SKP205-201ENST00000410999 307 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 PTPN2P1-201ENST00000423212 1072 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 ATP6V1G1P4-201ENST00000438388 335 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SL350P-201ENST00000492591 299 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 IGHV3-57-201ENST00000520143 280 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 EEF1A1P17-201ENST00000547505 1275 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC068408.1-201ENST00000577406 1144 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 MIR3159-201ENST00000584572 74 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AC007423.1-201ENST00000605009 627 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 AL391262.2-201ENST00000622466 494 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 CYP2G2P-201ENST00000594920 1485 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 CASC19-228ENST00000641414 1684 ntBASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CDK5RAP3Q96JB5 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 UGT2B27P-201ENST00000505092 1620 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 COG2-209ENST00000534989 2963 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MR1-209ENST00000617803 7584 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 RGS5-202ENST00000367903 934 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 RNU1-46P-201ENST00000384425 164 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MTCYBP14-201ENST00000457471 715 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 TFP1-201ENST00000460564 572 ntTSL 4 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 RN7SL70P-201ENST00000478322 302 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 TFP1-203ENST00000490470 561 ntTSL 4 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 SNORA58-201ENST00000505219 137 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC083906.1-201ENST00000509298 406 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 OR52H2P-201ENST00000514607 902 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AP000662.1-201ENST00000530952 487 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AL731537.2-201ENST00000561565 951 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC091133.5-201ENST00000603088 301 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC022387.2-201ENST00000604050 448 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AL356986.1-201ENST00000604085 341 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC247036.1-201ENST00000605005 389 ntTSL 2 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MIR6883-201ENST00000614952 78 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 CNTNAP3P1-201ENST00000616657 906 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC005277.2-201ENST00000617898 390 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 MIR7854-201ENST00000620068 65 ntBASIC7.45□□□□□ -1.22
CDK5RAP3Q96JB5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms