Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPL3P13-201ENST00000550415 216 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 SYPL1P2-201ENST00000582878 727 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 AC019257.2-201ENST00000605539 497 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC068726.1-201ENST00000610993 341 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
H3F3AP84243 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
H3F3AP84243 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.81□□□□□ -1.48
H3F3AP84243 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.81□□□□□ -1.48
H3F3AP84243 AL731556.1-201ENST00000394628 3711 ntBASIC5.81□□□□□ -1.48
H3F3AP84243 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.8□□□□□ -1.48
H3F3AP84243 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 AL391261.1-201ENST00000555712 1479 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 RNU1-84P-201ENST00000365447 164 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC245036.1-201ENST00000391727 309 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3AP84243 OR6R1P-201ENST00000431838 940 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC015524.1-201ENST00000491585 472 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 SNRPCP11-201ENST00000492453 205 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC093664.1-201ENST00000511779 289 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 SNORA81.2-201ENST00000516868 170 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 AL133399.1-201ENST00000527476 298 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC133552.4-201ENST00000576103 676 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 MIR4732-201ENST00000581873 76 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 AL390877.1-201ENST00000605704 214 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 GAPDHP41-201ENST00000613707 975 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 MIR6085-201ENST00000618314 110 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 AC012254.5-201ENST00000623573 478 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
H3F3AP84243 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.8□□□□□ -1.48
H3F3AP84243 AL359694.2-201ENST00000567753 1615 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
H3F3AP84243 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
H3F3AP84243 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.8□□□□□ -1.48
H3F3AP84243 CDY5P-201ENST00000411487 1580 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 CDY9P-201ENST00000451397 1580 ntBASIC5.8□□□□□ -1.48
H3F3AP84243 AC078880.4-201ENST00000617627 1749 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
H3F3AP84243 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
H3F3AP84243 TNPO1P2-201ENST00000426249 2665 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 AC073365.1-203ENST00000641055 1992 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
H3F3AP84243 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
H3F3AP84243 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 RNA5SP333-201ENST00000363466 118 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 RNA5SP512-201ENST00000364550 120 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 RNA5SP334-201ENST00000364825 118 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
H3F3AP84243 RN7SKP221-201ENST00000410420 301 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.79□□□□□ -1.48
H3F3AP84243 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.79□□□□□ -1.48
H3F3AP84243 MRPS21P3-201ENST00000436696 262 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 RPEP4-201ENST00000437636 602 ntBASIC5.79□□□□□ -1.48
H3F3AP84243 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms