Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC11.08□□□□□ -0.64
SMARCA4P51532 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
SMARCA4P51532 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 SORBS2-201ENST00000284776 5996 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 TNIK-201ENST00000284483 4059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SMARCA4P51532 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
SMARCA4P51532 AC093166.4-201ENST00000457867 318 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 RPL32P9-201ENST00000487963 407 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC11.07□□□□□ -0.64
SMARCA4P51532 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC11.07□□□□□ -0.64
SMARCA4P51532 DPPA2P4-201ENST00000563717 878 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 AC016769.4-201ENST00000616893 535 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 CCT5-215ENST00000625723 135 ntTSL 5 BASIC11.07□□□□□ -0.64
SMARCA4P51532 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 AC061975.7-201ENST00000592016 2692 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 MCF2L2-203ENST00000447025 2394 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 FLJ42393-201ENST00000623801 2270 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 LRRC37A6P-202ENST00000448648 5444 ntBASIC11.07□□□□□ -0.64
SMARCA4P51532 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC11.07□□□□□ -0.64
SMARCA4P51532 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC11.07□□□□□ -0.64
SMARCA4P51532 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
SMARCA4P51532 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 U3.7-201ENST00000363668 216 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AL050335.1-201ENST00000396909 869 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC11.06□□□□□ -0.64
SMARCA4P51532 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC11.06□□□□□ -0.64
SMARCA4P51532 RN7SL466P-201ENST00000497546 295 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC11.06□□□□□ -0.64
SMARCA4P51532 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 GPR151-201ENST00000311104 3088 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SMARCA4P51532 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC11.06□□□□□ -0.64
SMARCA4P51532 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC021074.2-201ENST00000468434 172 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 AC115837.1-201ENST00000517662 1001 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC11.06□□□□□ -0.64
SMARCA4P51532 AC006924.1-201ENST00000610750 559 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 AC096861.1-201ENST00000616652 240 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 RN7SL544P-201ENST00000617232 284 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 RN7SL763P-201ENST00000620922 284 ntBASIC11.06□□□□□ -0.64
SMARCA4P51532 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
SMARCA4P51532 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC11.05□□□□□ -0.64
SMARCA4P51532 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
SMARCA4P51532 USP3-201ENST00000268049 5311 ntTSL 5 BASIC11.05□□□□□ -0.64
SMARCA4P51532 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC11.05□□□□□ -0.64
SMARCA4P51532 AL590763.1-201ENST00000398297 1545 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 CCNT2P1-201ENST00000423082 1315 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
SMARCA4P51532 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
SMARCA4P51532 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC11.05□□□□□ -0.64
SMARCA4P51532 PIGP-202ENST00000360525 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC11.05□□□□□ -0.64
SMARCA4P51532 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
SMARCA4P51532 RNA5SP234-201ENST00000363916 119 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 NIPA2P1-201ENST00000426223 976 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 YWHAEP1-201ENST00000453697 763 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 EIF3LP3-201ENST00000495197 822 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC11.05□□□□□ -0.64
SMARCA4P51532 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC11.05□□□□□ -0.64
SMARCA4P51532 AC091078.2-201ENST00000557145 559 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC11.05□□□□□ -0.64
SMARCA4P51532 AC004808.2-201ENST00000627965 773 ntBASIC11.05□□□□□ -0.64
SMARCA4P51532 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
SMARCA4P51532 FAM186A-203ENST00000543096 2116 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
SMARCA4P51532 AC105114.1-201ENST00000624795 1862 ntBASIC11.04□□□□□ -0.64
SMARCA4P51532 BSN-201ENST00000296452 15955 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC11.04□□□□□ -0.64
SMARCA4P51532 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 LSAMP-205ENST00000490035 9446 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
SMARCA4P51532 DMBT1-203ENST00000344338 7656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms