Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 RNA5SP382-201ENST00000363355 112 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 UBBP1-201ENST00000392399 473 ntBASIC5.75□□□□□ -1.49
SRP9P49458 RPS17P17-201ENST00000419392 409 ntBASIC5.75□□□□□ -1.49
SRP9P49458 ETF1P1-206ENST00000427296 984 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AL590128.1-201ENST00000433407 286 ntBASIC5.75□□□□□ -1.49
SRP9P49458 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 GAPDHP20-201ENST00000444107 1007 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 RN7SKP198-201ENST00000459286 306 ntBASIC5.75□□□□□ -1.49
SRP9P49458 RN7SL372P-201ENST00000461982 298 ntBASIC5.75□□□□□ -1.49
SRP9P49458 RN7SL165P-201ENST00000477476 291 ntBASIC5.75□□□□□ -1.49
SRP9P49458 RPL7AP23-201ENST00000482625 776 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 MTCO1P55-201ENST00000489829 745 ntBASIC5.75□□□□□ -1.49
SRP9P49458 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.75□□□□□ -1.49
SRP9P49458 AC010442.1-201ENST00000515583 816 ntBASIC5.75□□□□□ -1.49
SRP9P49458 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 AC084337.1-201ENST00000524809 686 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AP002004.1-206ENST00000532441 876 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC5.75□□□□□ -1.49
SRP9P49458 AC068408.1-201ENST00000577406 1144 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 AC009237.12-201ENST00000604755 742 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 MIR6774-201ENST00000614651 70 ntBASIC5.75□□□□□ -1.49
SRP9P49458 AC127071.2-201ENST00000623293 527 ntBASIC5.75□□□□□ -1.49
SRP9P49458 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 AC119674.1-213ENST00000641177 1386 ntBASIC5.75□□□□□ -1.49
SRP9P49458 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 AC110373.1-201ENST00000505994 3505 ntBASIC5.75□□□□□ -1.49
SRP9P49458 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 AC079753.1-201ENST00000623243 3868 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC015799.1-201ENST00000622996 3122 ntBASIC5.74□□□□□ -1.49
SRP9P49458 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SRP9P49458 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 AC005725.1-201ENST00000577346 2607 ntBASIC5.74□□□□□ -1.49
SRP9P49458 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.74□□□□□ -1.49
SRP9P49458 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
SRP9P49458 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 RPL18AP14-201ENST00000417685 526 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC5.74□□□□□ -1.49
SRP9P49458 AC245884.2-201ENST00000426257 404 ntBASIC5.74□□□□□ -1.49
SRP9P49458 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.74□□□□□ -1.49
SRP9P49458 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.74□□□□□ -1.49
SRP9P49458 RPS19P6-201ENST00000441327 433 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.74□□□□□ -1.49
SRP9P49458 RPL23AP28-201ENST00000448062 470 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC022080.2-201ENST00000452932 533 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.74□□□□□ -1.49
SRP9P49458 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 RN7SL350P-201ENST00000492591 299 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 AC122714.1-201ENST00000502510 459 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC091849.1-201ENST00000509920 121 ntBASIC5.74□□□□□ -1.49
SRP9P49458 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC5.74□□□□□ -1.49
SRP9P49458 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.74□□□□□ -1.49
SRP9P49458 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.74□□□□□ -1.49
SRP9P49458 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.74□□□□□ -1.49
SRP9P49458 SETP17-201ENST00000534163 817 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC140063.1-201ENST00000541343 259 ntBASIC5.74□□□□□ -1.49
SRP9P49458 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC5.74□□□□□ -1.49
SRP9P49458 HMGN2P47-201ENST00000559378 272 ntBASIC5.74□□□□□ -1.49
SRP9P49458 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.74□□□□□ -1.49
SRP9P49458 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SRP9P49458 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms