Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 USP46-202ENST00000451218 4622 ntTSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 RNU1-19P-201ENST00000363306 165 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCN4AP35499 AL391422.1-201ENST00000402155 436 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 SPTLC1P2-201ENST00000407089 121 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 RNU4-34P-201ENST00000410431 124 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 ZNF619P1-201ENST00000446539 752 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 RN7SL705P-201ENST00000481678 294 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 IGLV2-28-201ENST00000520681 304 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC7.53□□□□□ -1.2
SCN4AP35499 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 AC004808.2-201ENST00000627965 773 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 AL034408.1-201ENST00000637712 664 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 NTRK3-212ENST00000558676 4670 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.53□□□□□ -1.2
SCN4AP35499 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
SCN4AP35499 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.53□□□□□ -1.2
SCN4AP35499 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
SCN4AP35499 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC7.53□□□□□ -1.2
SCN4AP35499 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SCN4AP35499 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SCN4AP35499 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.53□□□□□ -1.2
SCN4AP35499 AC008171.1-201ENST00000395058 200 ntBASIC7.52□□□□□ -1.2
SCN4AP35499 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
SCN4AP35499 SIAH1P1-201ENST00000479411 923 ntBASIC7.52□□□□□ -1.2
SCN4AP35499 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.52□□□□□ -1.2
SCN4AP35499 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.52□□□□□ -1.2
SCN4AP35499 TSHZ2-205ENST00000626626 670 ntBASIC7.52□□□□□ -1.2
SCN4AP35499 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN4AP35499 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.21
SCN4AP35499 AC079777.1-201ENST00000623836 1953 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.52□□□□□ -1.21
SCN4AP35499 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 AC023245.2-201ENST00000530760 2978 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.52□□□□□ -1.21
SCN4AP35499 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 RNA5SP46-201ENST00000362370 120 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 RNU1-49P-201ENST00000363468 159 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 RN7SKP160-201ENST00000363804 340 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 OR7E101P-201ENST00000400428 513 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 BMS1P17-202ENST00000416720 316 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 RPS7P14-201ENST00000426405 583 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN4AP35499 AL512593.1-201ENST00000444758 779 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 SUMO2P10-201ENST00000452006 288 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN4AP35499 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN4AP35499 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.52□□□□□ -1.21
SCN4AP35499 AP005119.1-201ENST00000580956 292 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 AC025171.4-201ENST00000607250 1047 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 AC079395.2-201ENST00000610982 737 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 AC131009.3-201ENST00000621809 287 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.52□□□□□ -1.21
SCN4AP35499 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SCN4AP35499 ZNF100-202ENST00000358296 5745 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SCN4AP35499 LINC01963-201ENST00000562038 3148 ntBASIC7.52□□□□□ -1.21
SCN4AP35499 AC093278.2-201ENST00000564956 2485 ntBASIC7.51□□□□□ -1.21
SCN4AP35499 STAB2-201ENST00000388887 8251 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
SCN4AP35499 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.51□□□□□ -1.21
SCN4AP35499 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCN4AP35499 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 PLCG2-201ENST00000359376 3819 ntTSL 5 BASIC7.51□□□□□ -1.21
SCN4AP35499 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SCN4AP35499 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.51□□□□□ -1.21
SCN4AP35499 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
SCN4AP35499 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 SCAPER-202ENST00000324767 4707 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
SCN4AP35499 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
SCN4AP35499 Y_RNA.625-201ENST00000411256 107 ntBASIC7.51□□□□□ -1.21
SCN4AP35499 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.51□□□□□ -1.21
SCN4AP35499 AC011225.1-201ENST00000457751 369 ntBASIC7.51□□□□□ -1.21
SCN4AP35499 RN7SL610P-201ENST00000463845 291 ntBASIC7.51□□□□□ -1.21
SCN4AP35499 SNORA70.20-201ENST00000516848 126 ntBASIC7.51□□□□□ -1.21
SCN4AP35499 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms