Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 RN7SL66P-201ENST00000582099 264 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 AP003789.1-201ENST00000617737 605 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AP001264.1-201ENST00000620602 703 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 MIR6813-201ENST00000621638 56 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AC073488.9-201ENST00000631601 754 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AC027559.1-201ENST00000636288 271 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 AL121936.2-201ENST00000641935 662 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AC009831.5-201ENST00000624000 3189 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC4.96□□□□□ -1.62
HLA-DMBP28068 AC062022.1-201ENST00000451026 1684 ntBASIC4.96□□□□□ -1.62
HLA-DMBP28068 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
HLA-DMBP28068 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 RNA5SP152-201ENST00000365184 110 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 MIR551B-201ENST00000384984 96 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 UBBP1-201ENST00000392399 473 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL590635.1-201ENST00000406314 586 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 OR2W4P-201ENST00000406496 926 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL023284.3-201ENST00000407767 334 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 RN7SKP205-201ENST00000410999 307 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC000089.1-201ENST00000424559 801 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 ETF1P1-206ENST00000427296 984 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 RPS10P21-201ENST00000430654 475 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 KATNBL1P2-201ENST00000433311 835 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL022324.2-201ENST00000434827 780 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 HMGN1P32-201ENST00000441744 256 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 WDR82P2-201ENST00000444540 928 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC073476.1-201ENST00000452854 407 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 RPL31P11-202ENST00000454082 372 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 B3GNTL1P1-201ENST00000509174 289 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 OR52H2P-201ENST00000514607 902 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 IGHVIII-47-1-201ENST00000518187 331 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 NIFKP4-201ENST00000567275 1192 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 ARGFXP2-201ENST00000579304 949 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AL352984.2-202ENST00000613699 155 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 AC114546.4-201ENST00000624413 369 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 MAPK10-357ENST00000641831 2858 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 MAPK10-287ENST00000641217 3037 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.95□□□□□ -1.62
HLA-DMBP28068 NCOA4P2-201ENST00000340589 1813 ntBASIC4.95□□□□□ -1.62
HLA-DMBP28068 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
HLA-DMBP28068 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms