Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 Metazoa_SRP.74-201ENST00000614973 284 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 HIST1H2BB-201ENST00000615966 381 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC243830.2-201ENST00000618067 630 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 FTX_5.1-201ENST00000618701 218 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC015871.5-202ENST00000623252 701 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC008870.5-201ENST00000624143 650 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC004023.1-201ENST00000561473 1744 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 MEMO1-203ENST00000404530 1482 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AL133243.2-201ENST00000610331 1621 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 AC100810.3-201ENST00000633189 2240 ntBASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.15□□□□□ -1.91
LINC01558Q9Y6Z2 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 MAPK10-349ENST00000641767 3661 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR14L1P-202ENST00000641545 3009 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR13H1-201ENST00000338616 927 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 ARL4A-202ENST00000396662 1296 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 FDPSP5-201ENST00000399474 1057 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RPL10P10-201ENST00000403509 664 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 PKMP3-201ENST00000405497 715 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SOD1P1-201ENST00000407803 440 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SKP199-201ENST00000410325 305 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RN7SKP296-201ENST00000411185 341 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC019205.1-201ENST00000421830 730 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 KCTD9P1-201ENST00000430462 1167 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC024082.1-201ENST00000435250 699 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01422-202ENST00000438113 517 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AL512366.1-201ENST00000438919 636 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC078842.1-201ENST00000438969 553 ntTSL 4 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC097382.1-201ENST00000441093 591 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RPL24P8-201ENST00000446071 474 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC104843.1-201ENST00000451203 319 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RPL7AP50-201ENST00000452821 795 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SEPHS1P7-201ENST00000452995 1177 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 FRG2FP-204ENST00000453982 852 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AL591122.1-201ENST00000487348 492 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 MYL12BP2-201ENST00000503948 512 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC233724.8-201ENST00000504574 234 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC113430.1-201ENST00000506872 718 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC233724.3-201ENST00000512613 128 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SUCLG2P4-201ENST00000514739 1027 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC138938.1-201ENST00000515431 782 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SEPT10P1-201ENST00000517342 1162 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 C5orf58-202ENST00000517575 718 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 OR6M2P-201ENST00000529831 871 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 H2AFZP4-201ENST00000534148 377 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC02443-201ENST00000536518 585 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 BLOC1S5-205ENST00000543936 368 ntTSL 2 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 BNIP3P1-201ENST00000547295 580 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 Metazoa_SRP.53-201ENST00000548393 281 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC117372.1-201ENST00000548633 620 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 TROAP-209ENST00000549275 348 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 COX5AP2-201ENST00000554418 394 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC091078.2-201ENST00000557145 559 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC011939.1-201ENST00000567680 964 ntBASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 LINC01764-202ENST00000589310 441 ntTSL 3 BASIC3.14□□□□□ -1.91
LINC01558Q9Y6Z2 RPSAP66-201ENST00000592196 606 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms