Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 OR2G6-201ENST00000343414 1049 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 MIR152-201ENST00000385212 87 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AL353692.2-201ENST00000407054 335 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 RNA5SP177-201ENST00000410122 107 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 RNU4-64P-201ENST00000410795 131 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC235097.1-201ENST00000412163 681 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC011242.1-201ENST00000433596 1158 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AL392003.1-201ENST00000434394 243 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC092106.1-201ENST00000444291 373 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC019080.2-201ENST00000453859 394 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 MTATP6P14-201ENST00000455189 673 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 CEACAMP11-201ENST00000455211 583 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AP000805.1-201ENST00000471604 784 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC022730.1-201ENST00000473114 568 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AF305872.1-201ENST00000485217 471 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 OR5M4P-201ENST00000529436 925 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 NF1P12-201ENST00000549593 583 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 ARGFXP2-201ENST00000579304 949 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC011193.2-201ENST00000582638 367 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 FAM60CP-201ENST00000591086 664 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC006116.5-201ENST00000591936 559 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC005070.2-201ENST00000604391 260 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC034236.3-201ENST00000605999 461 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC096586.2-201ENST00000610260 441 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 MIR6070-201ENST00000613967 103 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 LINC00216-201ENST00000623548 1126 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AC010608.3-201ENST00000625048 527 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 NPLOC4-221ENST00000625705 405 ntTSL 5 BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 OR6C71P-202ENST00000641886 1107 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 AL021877.2-201ENST00000624442 10684 ntBASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
AMBRA1Q9C0C7 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 ZNF658B-201ENST00000602828 3408 ntBASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 AC079949.2-201ENST00000617117 2933 ntBASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 EPS15P1-202ENST00000459691 2071 ntBASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 AP002800.1-201ENST00000624982 2225 ntBASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
AMBRA1Q9C0C7 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC092646.2-201ENST00000431242 2095 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC107977.1-201ENST00000355745 939 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC091492.1-201ENST00000419844 272 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL121882.1-201ENST00000422893 417 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 Z80107.1-201ENST00000436830 412 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 RPS3AP53-201ENST00000454716 778 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 RN7SL561P-201ENST00000488553 281 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 TRAV31-201ENST00000502780 342 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 MTND6P8-201ENST00000503471 522 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC098862.1-201ENST00000504991 413 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC021220.1-201ENST00000507445 630 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC034244.2-201ENST00000514668 858 ntBASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.39□□□□□ -1.39
AMBRA1Q9C0C7 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms