Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 RNA5SP333-201ENST00000363466 118 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 RNA5SP334-201ENST00000364825 118 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 CYP4F30P-202ENST00000420048 405 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 RN7SL643P-201ENST00000471845 291 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 EIF4E2P2-201ENST00000492033 736 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC027229.1-201ENST00000583887 253 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC022726.2-201ENST00000634673 547 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC010325.3-201ENST00000641084 394 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 AC090181.3-201ENST00000624777 1514 ntBASIC9.19□□□□□ -0.94
SIN3AQ96ST3 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
SIN3AQ96ST3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AL354893.1-201ENST00000433735 348 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 EIF3EP1-201ENST00000433978 1316 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 RN7SL552P-201ENST00000462094 276 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC104339.1-201ENST00000465478 348 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 OR7E22P-201ENST00000478335 1035 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 RN7SL714P-201ENST00000487050 298 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 OR4D12P-201ENST00000509361 911 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC105384.1-201ENST00000512405 835 ntTSL 3 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 RN7SKP183-201ENST00000517169 324 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC121758.1-202ENST00000556917 658 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 MIR3189-201ENST00000578735 73 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC011497.2-201ENST00000600255 639 ntBASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 ZNF585B-203ENST00000527838 2732 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
SIN3AQ96ST3 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 SMG1P5-202ENST00000529428 4219 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 SMG1P2-201ENST00000566127 4221 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 FAM32BP-201ENST00000344033 333 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 RN7SKP121-201ENST00000410842 305 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 RPS27AP3-201ENST00000453803 454 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 SNX18P26-201ENST00000458433 740 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 RN7SL104P-201ENST00000498686 293 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AC112484.3-201ENST00000505910 329 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 APOBEC3AP1-201ENST00000511396 287 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 OR4A41P-201ENST00000533053 928 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AC233702.7-202ENST00000582941 211 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AC137695.1-201ENST00000604126 489 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AP002345.2-201ENST00000609961 904 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 MIR6721-201ENST00000617181 87 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 AL450226.2-201ENST00000622913 439 ntBASIC9.17□□□□□ -0.94
SIN3AQ96ST3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SIN3AQ96ST3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms