Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 RN7SKP148-201ENST00000410179 275 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 LSM3P3-201ENST00000436601 306 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 RPS26P11-201ENST00000463445 348 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AP000805.1-201ENST00000471604 784 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 RPS26P6-201ENST00000475156 348 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 RPS4XP23-201ENST00000487801 237 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC122714.1-201ENST00000502510 459 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AL132640.1-201ENST00000559594 619 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 MIR4428-201ENST00000584884 73 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC007255.2-201ENST00000604053 631 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC007671.1-201ENST00000616957 830 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AP005212.3-201ENST00000619964 528 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC018659.2-201ENST00000624690 715 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC011471.4-201ENST00000638271 216 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AL512353.3-201ENST00000417517 1326 ntBASIC6.49□□□□□ -1.37
VMP1Q96GC9 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
VMP1Q96GC9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.49□□□□□ -1.37
VMP1Q96GC9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 SEC31A-207ENST00000443462 4042 ntTSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC234781.4-201ENST00000419384 244 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 RPL12P43-201ENST00000420608 499 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC018804.1-201ENST00000430381 618 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 HMGN1P6-201ENST00000438508 291 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC016908.1-201ENST00000442571 1219 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 MAGEC3-203ENST00000443323 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AL096803.1-201ENST00000456921 1021 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC008868.1-201ENST00000509786 737 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 SCARNA11.1-201ENST00000516918 132 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 OR9L1P-201ENST00000529493 933 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC027026.1-201ENST00000532323 742 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC084816.1-202ENST00000536744 647 ntTSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC007537.1-201ENST00000539347 327 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC137695.1-201ENST00000604126 489 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AP001885.1-201ENST00000621658 558 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 DAZ1-201ENST00000382510 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AL662795.2-201ENST00000624252 3706 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 AC129502.1-201ENST00000623261 1654 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
VMP1Q96GC9 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
VMP1Q96GC9 LINC02019-201ENST00000608605 2060 ntBASIC6.48□□□□□ -1.37
VMP1Q96GC9 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms