Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 RN7SL216P-201ENST00000471607 298 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 RPL23AP80-201ENST00000495605 424 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 OR4C1P-201ENST00000530880 937 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 HNRNPCP1-201ENST00000556181 766 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC025430.1-201ENST00000561324 498 ntTSL 3 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC007494.1-201ENST00000562293 760 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC024451.4-201ENST00000602578 752 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC092960.1-201ENST00000604762 351 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC012510.1-201ENST00000607946 759 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 AL136097.3-201ENST00000611097 505 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 U1.25-201ENST00000614085 162 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 U1.34-201ENST00000618578 162 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 U1.31-201ENST00000620022 160 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AC079753.1-201ENST00000623243 3868 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
RFT1Q96AA3 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 AL161912.4-201ENST00000623889 2468 ntBASIC5.81□□□□□ -1.48
RFT1Q96AA3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RFT1Q96AA3 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL359263.1-201ENST00000441188 2796 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC226101.1-201ENST00000401483 387 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 MYL6P3-201ENST00000436904 432 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC092421.1-201ENST00000448148 418 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 GOT2P2-201ENST00000450663 1251 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 NMNAT1P3-201ENST00000457517 888 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC097460.2-201ENST00000511857 741 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 NDUFA3P2-201ENST00000531434 232 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC078950.1-201ENST00000538349 550 ntTSL 4 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 DCTN5-204ENST00000563998 878 ntTSL 3 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC010615.3-201ENST00000597319 394 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 MIR6807-201ENST00000621968 92 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 AL162377.2-201ENST00000624532 337 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 Z97989.1-201ENST00000531702 2421 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 MTCO1P25-201ENST00000414449 1799 ntBASIC5.8□□□□□ -1.48
RFT1Q96AA3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
RFT1Q96AA3 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
RFT1Q96AA3 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RFT1Q96AA3 HSP90AA2P-201ENST00000530115 2196 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC012078.1-201ENST00000405035 1646 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 RNA5SP114-201ENST00000363780 113 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 RN7SKP1-201ENST00000365525 307 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 NPM1P31-201ENST00000399021 764 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 RPL12P10-201ENST00000413498 498 ntBASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC022535.1-201ENST00000420082 691 ntTSL 3 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC5.79□□□□□ -1.48
RFT1Q96AA3 AC239367.3-201ENST00000428996 814 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms