Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 SNX18P3-202ENST00000565670 1750 ntBASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
C9orf40Q8IXQ3 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC023632.6-201ENST00000624338 2177 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AP002370.1-201ENST00000528055 1602 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 RNA5SP512-201ENST00000364550 120 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AL050335.1-201ENST00000396909 869 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 PRELID1P1-201ENST00000403549 660 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 MTND4LP17-201ENST00000414607 293 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AL139184.1-202ENST00000422303 222 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 GTF2IP14-201ENST00000441415 586 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 RPL12P7-201ENST00000493832 494 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AP003033.2-201ENST00000528901 805 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC023968.1-201ENST00000560719 475 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 MT1CP-201ENST00000567054 174 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 RN7SL475P-201ENST00000583379 298 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC011500.1-201ENST00000601963 469 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC012676.3-201ENST00000614983 479 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 AL117339.4-201ENST00000608335 7063 ntBASIC5.97□□□□□ -1.45
C9orf40Q8IXQ3 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 AC022905.1-201ENST00000503430 3048 ntBASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 AC011455.2-201ENST00000599320 3336 ntBASIC5.96□□□□□ -1.45
C9orf40Q8IXQ3 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 YWHAZP4-201ENST00000392459 708 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 RPL21P50-201ENST00000417698 477 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 GM2AP2-201ENST00000491764 562 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 RN7SL568P-201ENST00000493069 298 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC117500.1-201ENST00000497352 755 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 KATNBL1P4-201ENST00000503545 918 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC091965.3-201ENST00000506236 208 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC131182.1-201ENST00000509184 657 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 TPRX1P1-201ENST00000557620 319 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
C9orf40Q8IXQ3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms