Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RPL17P37-201ENST00000490729 548 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RN7SL434P-201ENST00000495872 271 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC226119.2-201ENST00000513501 530 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RNA5SP422-201ENST00000516778 111 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RN7SKP197-201ENST00000517077 297 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 FAXDC2-206ENST00000518651 536 ntTSL 4 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC122685.1-202ENST00000556750 555 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC022898.1-202ENST00000560864 806 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ULK4P2-202ENST00000564187 492 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC004224.2-201ENST00000574423 529 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC068790.7-201ENST00000602347 528 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AC010385.2-201ENST00000603743 490 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 SUMO2P14-201ENST00000604488 293 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 CLK4-214ENST00000611575 1206 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AL669830.1-201ENST00000621457 656 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ERG-206ENST00000398911 4914 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AF228730.7-203ENST00000641436 1804 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ZSCAN31-202ENST00000396838 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ARMC3-202ENST00000376528 3258 ntTSL 2 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 NEPNP-201ENST00000404786 1371 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 OR10AB1P-202ENST00000641219 1686 ntBASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 LINC01133-203ENST00000635112 1996 ntTSL 5 BASIC8.72□□□□□ -1.01
SCUBE3Q8IX30 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 AL022578.1-201ENST00000439330 1433 ntBASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 ZBTB18-202ENST00000622512 3740 ntAPPRIS ALT1 TSL 3 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 KNG1-202ENST00000287611 1720 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 MSL3-201ENST00000312196 2345 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 AC009148.1-201ENST00000570148 2693 ntBASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 CD101-201ENST00000256652 3283 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 GPBP1L1-201ENST00000290795 3599 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 UTP23-201ENST00000309822 3699 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 ZFP42-202ENST00000509524 2480 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
SCUBE3Q8IX30 DAZ2-207ENST00000382449 3791 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 CREM-213ENST00000374734 711 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AL138807.1-201ENST00000400354 459 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 CAPNS1P1-201ENST00000401029 633 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC111200.2-201ENST00000418877 505 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AP000997.1-201ENST00000424313 479 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 CYP4F26P-202ENST00000433357 852 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC007790.1-201ENST00000439081 782 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AL591363.1-201ENST00000450091 483 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 CREM-231ENST00000479070 939 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 PFN2-209ENST00000481275 560 ntTSL 4 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC096576.1-201ENST00000489014 359 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 RN7SL608P-201ENST00000492377 279 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 EGFLAM-AS1-201ENST00000508986 331 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC091133.4-201ENST00000511142 308 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AP003385.2-201ENST00000524910 973 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AP000445.1-201ENST00000526692 741 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AP003721.2-201ENST00000536495 452 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC048344.2-201ENST00000547280 147 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC104046.1-201ENST00000559487 406 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AC012065.4-201ENST00000602445 679 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 AL050343.2-201ENST00000607338 280 ntBASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC8.71□□□□□ -1.02
SCUBE3Q8IX30 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC8.71□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms