Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RNA5SP301-201ENST00000362537 121 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 S100A13-202ENST00000392622 547 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL031577.2-201ENST00000404133 280 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 LINC00676-201ENST00000416090 474 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 MRPS36P1-201ENST00000421291 307 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL392003.1-201ENST00000434394 243 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 WBP1LP7-201ENST00000437905 363 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 HMGB3P6-201ENST00000444896 598 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL158829.1-201ENST00000449258 478 ntTSL 3 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RPS29P16-201ENST00000452798 171 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ALG13-211ENST00000473389 693 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC226119.2-201ENST00000513501 530 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP190-201ENST00000516079 286 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RNA5SP159-201ENST00000517161 103 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 TBCA-206ENST00000518338 551 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC025881.1-201ENST00000518851 512 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 BUD31P1-201ENST00000521828 359 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AP001804.1-201ENST00000526868 919 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 SDHCP4-201ENST00000532834 510 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AP000916.1-201ENST00000533869 835 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC124891.1-201ENST00000536322 519 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RPL41-204ENST00000546591 699 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC009171.1-201ENST00000572673 266 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC136944.5-201ENST00000573021 151 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL583832.1-201ENST00000603227 784 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC119501.1-201ENST00000603646 475 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC023983.2-201ENST00000608010 562 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC012511.1-201ENST00000608140 449 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 OR7M1P-201ENST00000608946 533 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC010542.5-201ENST00000612427 382 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC023310.4-201ENST00000613130 650 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AP002505.2-201ENST00000623585 696 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 CASC22-202ENST00000628396 802 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC099654.12-201ENST00000639868 649 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 AC106800.1-201ENST00000501221 1362 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 UGT2B25P-201ENST00000511504 1586 ntBASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
FOXR1Q6PIV2 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 LINC02035-201ENST00000610128 5476 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 B4GALNT2-202ENST00000393354 8657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AC016716.1-201ENST00000265882 708 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 FAM3C2-201ENST00000312214 681 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 MTHFD2P5-201ENST00000320415 844 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP76-201ENST00000364419 323 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 GPN2-201ENST00000374133 715 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RNU6-796P-201ENST00000391086 107 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 TMEM126B-202ENST00000393375 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 MIR1277-201ENST00000408536 78 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RNU2-66P-201ENST00000410650 161 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 RN7SKP39-201ENST00000410773 322 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 TRIM43CP-201ENST00000422468 1028 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 NAP1L4P2-201ENST00000425958 899 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 KCTD9P1-201ENST00000430462 1167 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 TRIM60P3Y-201ENST00000432201 673 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 B3GNT2P1-201ENST00000434960 952 ntBASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AL138957.1-201ENST00000435156 342 ntTSL 3 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
FOXR1Q6PIV2 AL008638.2-201ENST00000453934 2383 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms