Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 LYARP1-201ENST00000436977 1501 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 SMG1P5-202ENST00000529428 4219 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 SMG1P2-201ENST00000566127 4221 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 RPL12P31-201ENST00000478433 450 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC131392.1-201ENST00000506490 633 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 OR51A1P-201ENST00000511110 946 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CYCSP38-201ENST00000559840 322 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC023968.1-201ENST00000560719 475 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 MIR6811-201ENST00000620409 58 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AP001052.1-201ENST00000626421 99 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 EIF2A-202ENST00000406576 1795 ntTSL 2 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 MAPK10-270ENST00000641102 3538 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 LPAL2-203ENST00000454031 2498 ntBASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
SHROOM1Q2M3G4 EIF3EP1-201ENST00000433978 1316 ntBASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC7.52□□□□□ -1.2
SHROOM1Q2M3G4 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 MIR130B-202ENST00000385018 82 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC010978.1-202ENST00000427050 893 ntTSL 3 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 Z68868.1-201ENST00000429048 544 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 RPS29P14-201ENST00000431518 171 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC023141.3-201ENST00000436698 278 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 EMC3-AS1-205ENST00000438698 534 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 RN7SL369P-201ENST00000477138 299 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 LDHAP1-201ENST00000509421 992 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC006499.4-201ENST00000510947 694 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 IGHV3-57-201ENST00000520143 280 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC002519.2-203ENST00000567043 837 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 MRPS21P9-201ENST00000571150 257 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AL359976.1-201ENST00000418655 3528 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 MAPK10-383ENST00000642032 3390 ntBASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 ADA2-201ENST00000262607 3925 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SHROOM1Q2M3G4 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms