Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
CCDC27Q2M243 AP003119.3-201ENST00000566747 4192 ntBASIC8.98□□□□□ -0.97
CCDC27Q2M243 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 SLC2A3P4-201ENST00000521259 1471 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 RNU6-1251P-201ENST00000364502 107 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 MIR187-201ENST00000385062 109 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC007068.1-201ENST00000396690 844 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 RN7SKP199-201ENST00000410325 305 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 RPLP1P10-201ENST00000413972 339 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 GLUD1P9-201ENST00000420997 1173 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL606495.1-201ENST00000422100 813 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 HBG2-204ENST00000444587 307 ntTSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 CCRL1P1-201ENST00000449542 1053 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC063955.1-201ENST00000462872 685 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 RPS26P11-201ENST00000463445 348 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 RPS26P6-201ENST00000475156 348 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 RN7SL187P-201ENST00000495587 303 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC096661.1-201ENST00000515870 822 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 RNA5SP318-201ENST00000516352 92 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC026407.1-201ENST00000518369 204 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC087752.2-201ENST00000521219 281 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 OR7E13P-201ENST00000526052 910 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 LDHC-204ENST00000536880 957 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 CTSLP2-201ENST00000580501 394 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC091057.3-201ENST00000602684 733 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL133370.2-201ENST00000619934 439 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC025287.2-201ENST00000621911 668 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC068787.1-201ENST00000623908 691 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC106782.7-201ENST00000624024 418 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC133555.5-201ENST00000624430 418 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 AC007993.1-201ENST00000621298 2430 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AL645568.2-201ENST00000432815 1337 ntBASIC8.97□□□□□ -0.97
CCDC27Q2M243 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 CA10-204ENST00000570565 2276 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 TIAL1-203ENST00000369093 5072 ntTSL 2 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.97□□□□□ -0.97
CCDC27Q2M243 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
CCDC27Q2M243 AP002364.1-201ENST00000623330 3386 ntBASIC8.96□□□□□ -0.97
CCDC27Q2M243 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.97
CCDC27Q2M243 GAPVD1-215ENST00000470056 8923 ntTSL 5 BASIC8.96□□□□□ -0.97
CCDC27Q2M243 KCNMA1-266ENST00000639601 11920 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
CCDC27Q2M243 AC067942.1-201ENST00000488045 1493 ntBASIC8.96□□□□□ -0.97
CCDC27Q2M243 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.96□□□□□ -0.97
CCDC27Q2M243 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CCDC27Q2M243 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
CCDC27Q2M243 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
CCDC27Q2M243 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
CCDC27Q2M243 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
CCDC27Q2M243 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC27Q2M243 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC27Q2M243 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC27Q2M243 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 RPS10P21-201ENST00000430654 475 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 SEPT7P2-208ENST00000444755 505 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 AL157884.3-201ENST00000448273 1184 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 AL627224.1-201ENST00000448334 444 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
CCDC27Q2M243 RPS3AP53-201ENST00000454716 778 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 RN7SL492P-201ENST00000460700 295 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 CFI-204ENST00000510800 667 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 OR10J9P-201ENST00000511932 987 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 HMGN1P17-201ENST00000513734 295 ntBASIC8.96□□□□□ -0.98
CCDC27Q2M243 LINC02055-203ENST00000520068 712 ntTSL 2 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 CASP5-209ENST00000531367 879 ntTSL 5 BASIC8.96□□□□□ -0.98
CCDC27Q2M243 OR5BK1P-201ENST00000550421 823 ntBASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms