Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AL139805.1-201ENST00000407837 289 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 HSD17B7P1-201ENST00000412419 1017 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC117434.1-201ENST00000419971 836 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 RPSAP65-201ENST00000429660 595 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 RPS14P8-201ENST00000478778 369 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 OR52A4P-203ENST00000498233 1014 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC009879.1-201ENST00000520029 839 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC135626.1-201ENST00000556983 435 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC7.08□□□□□ -1.28
UBE3AQ05086 RN7SL404P-201ENST00000582421 281 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 AL121583.1-201ENST00000612444 682 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 AC116631.1-202ENST00000640984 683 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 AC022819.1-201ENST00000563495 3910 ntBASIC7.08□□□□□ -1.28
UBE3AQ05086 ADI1-202ENST00000382093 3870 ntTSL 2 BASIC7.08□□□□□ -1.28
UBE3AQ05086 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
UBE3AQ05086 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC7.08□□□□□ -1.28
UBE3AQ05086 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 BX322650.1-201ENST00000332359 2143 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 MFSD8-217ENST00000641178 4374 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
UBE3AQ05086 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
UBE3AQ05086 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE3AQ05086 RNA5SP188-201ENST00000362916 129 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 AL359092.1-201ENST00000417156 265 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 RPL21P50-201ENST00000417698 477 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC092865.3-201ENST00000425390 1026 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 COX4I1P2-201ENST00000447446 547 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 TVP23CP1-201ENST00000450317 639 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE3AQ05086 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE3AQ05086 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE3AQ05086 H3F3AP3-201ENST00000497682 407 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC112184.1-201ENST00000505179 312 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE3AQ05086 AC110056.1-201ENST00000525759 911 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE3AQ05086 NR2F2-AS1-209ENST00000560800 549 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE3AQ05086 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE3AQ05086 AC005632.2-201ENST00000564271 828 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC004232.2-201ENST00000574245 821 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE3AQ05086 AC087575.1-201ENST00000585087 229 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AP002345.2-201ENST00000609961 904 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 MIR6862-1-201ENST00000613016 70 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 MIR6862-2-201ENST00000614755 70 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 U1.41-201ENST00000617626 165 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 MIR8089-201ENST00000620165 82 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.07□□□□□ -1.28
UBE3AQ05086 UOX-205ENST00000640983 544 ntTSL 4 BASIC7.07□□□□□ -1.28
UBE3AQ05086 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 AKAP17BP-201ENST00000431706 2719 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.07□□□□□ -1.28
UBE3AQ05086 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
UBE3AQ05086 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 AC010401.2-201ENST00000575137 4934 ntBASIC7.07□□□□□ -1.28
UBE3AQ05086 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE3AQ05086 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC7.07□□□□□ -1.28
UBE3AQ05086 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
UBE3AQ05086 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
UBE3AQ05086 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms