Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC017007.1-201ENST00000511960 415 ntBASIC5.77□□□□□ -1.49
SRP9P49458 RN7SKP67-201ENST00000515905 235 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.77□□□□□ -1.49
SRP9P49458 SNRPCP6-201ENST00000528310 210 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.77□□□□□ -1.49
SRP9P49458 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.77□□□□□ -1.49
SRP9P49458 AP000619.2-201ENST00000546014 969 ntBASIC5.77□□□□□ -1.49
SRP9P49458 LINC02207-201ENST00000554530 1256 ntTSL 5 BASIC5.77□□□□□ -1.49
SRP9P49458 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.77□□□□□ -1.49
SRP9P49458 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SRP9P49458 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.77□□□□□ -1.49
SRP9P49458 AC125494.2-201ENST00000602431 657 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AL590032.1-201ENST00000604920 252 ntBASIC5.77□□□□□ -1.49
SRP9P49458 PTCHD3P1-201ENST00000612350 537 ntBASIC5.77□□□□□ -1.49
SRP9P49458 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 AC091059.2-201ENST00000623355 614 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AC106782.7-201ENST00000624024 418 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AC133555.5-201ENST00000624430 418 ntBASIC5.77□□□□□ -1.49
SRP9P49458 AC005858.3-201ENST00000624756 589 ntBASIC5.77□□□□□ -1.49
SRP9P49458 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
SRP9P49458 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
SRP9P49458 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SRP9P49458 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.77□□□□□ -1.49
SRP9P49458 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AC011369.2-201ENST00000624423 1567 ntBASIC5.76□□□□□ -1.49
SRP9P49458 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 Z97989.1-201ENST00000531702 2421 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 RNA5SP188-201ENST00000362916 129 ntBASIC5.76□□□□□ -1.49
SRP9P49458 SNORD8-201ENST00000363915 110 ntBASIC5.76□□□□□ -1.49
SRP9P49458 RN7SKP237-201ENST00000364663 301 ntBASIC5.76□□□□□ -1.49
SRP9P49458 RNU1-55P-201ENST00000365510 158 ntBASIC5.76□□□□□ -1.49
SRP9P49458 TMA16P2-201ENST00000413187 601 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.76□□□□□ -1.49
SRP9P49458 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.76□□□□□ -1.49
SRP9P49458 AHCYP8-201ENST00000425108 209 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.76□□□□□ -1.49
SRP9P49458 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 RPL7AP71-201ENST00000451120 739 ntBASIC5.76□□□□□ -1.49
SRP9P49458 TFP1-201ENST00000460564 572 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 TFP1-203ENST00000490470 561 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 RPL23AP80-201ENST00000495605 424 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC022126.1-201ENST00000502995 593 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AC093878.1-201ENST00000515630 432 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.76□□□□□ -1.49
SRP9P49458 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 AP005639.1-201ENST00000526939 192 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.76□□□□□ -1.49
SRP9P49458 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.76□□□□□ -1.49
SRP9P49458 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 CTSLP2-201ENST00000580501 394 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.76□□□□□ -1.49
SRP9P49458 RPS11-205ENST00000599561 430 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AL035410.2-201ENST00000604963 864 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 AL138960.1-201ENST00000613838 513 ntBASIC5.76□□□□□ -1.49
SRP9P49458 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 AC018628.1-201ENST00000624147 3819 ntBASIC5.76□□□□□ -1.49
SRP9P49458 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
SRP9P49458 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 AC095038.1-201ENST00000429248 1591 ntBASIC5.76□□□□□ -1.49
SRP9P49458 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
SRP9P49458 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.75□□□□□ -1.49
SRP9P49458 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.75□□□□□ -1.49
SRP9P49458 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SRP9P49458 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
SRP9P49458 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms